Difference between revisions of "DCTPtm"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN0-2381 == * direction: ** reversible * common-name: ** indoleglycerol phosphate aldolase * ec-number: ** [http://enzyme.expasy.org/EC/4.1....")
(Created page with "Category:reaction == Reaction RXN-14106 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/5.4.99.3 ec-5.4.99.3] == Reaction formula == * 1 2-ACE...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-2381 ==
+
== Reaction RXN-14106 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
* common-name:
 
** indoleglycerol phosphate aldolase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.1.2.8 ec-4.1.2.8]
+
** [http://enzyme.expasy.org/EC/5.4.99.3 ec-5.4.99.3]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[INDOLE-3-GLYCEROL-P]][c] '''<=>''' 1 [[GAP]][c] '''+''' 1 [[INDOLE]][c]
+
* 1 [[2-ACETO-2-HYDROXY-BUTYRATE]][c] '''<=>''' 1 [[CPD-15104]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ16706]]
+
* Gene: [[SJ10245]]
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ15468]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ10955]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ20325]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ09991]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6949]], DIBOA-glucoside biosynthesis:
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
* [[TRPSYN-PWY]], L-tryptophan biosynthesis:
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R02340 R02340]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05069 R05069]
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14084 14084]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25407 25407]
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: common-name=indoleglycerol phosphate aldolase}}
+
{{#set: ec-number=ec-5.4.99.3}}
{{#set: ec-number=ec-4.1.2.8}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=5}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 19:05, 14 January 2021

Reaction RXN-14106

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links