Difference between revisions of "DCTUP"

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(Created page with "Category:reaction == Reaction RXN-7913 == * direction: ** left-to-right * common-name: ** dcmp kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.25 ec-2.7.4.25] **...")
(Created page with "Category:reaction == Reaction DCTUP == * direction: ** left-to-right * common-name: ** dctp:uridine 5'-phosphotransferase == Reaction formula == * 1.0 DCTP[c] '''+'''...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7913 ==
+
== Reaction DCTUP ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** dcmp kinase
+
** dctp:uridine 5'-phosphotransferase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.7.4.25 ec-2.7.4.25]
 
−
** [http://enzyme.expasy.org/EC/2.7.4.14 ec-2.7.4.14]
 
−
** [http://enzyme.expasy.org/EC/2.7.4.13 ec-2.7.4.13]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[DCMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DCDP]][c]
+
* 1.0 [[DCTP]][c] '''+''' 1.0 [[URIDINE]][c] '''=>''' 1.0 [[DCDP]][c] '''+''' 1.0 [[PROTON]][c] '''+''' 1.0 [[UMP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ02034]]
−
* Gene: [[SJ01032]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ20076]]
+
* Gene: [[SJ15690]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ21099]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08159]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ21967]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25095 25095]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01665 R01665]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=dcmp kinase}}
+
{{#set: common-name=dctp:uridine 5'-phosphotransferase}}
−
{{#set: ec-number=ec-2.7.4.25|ec-2.7.4.14|ec-2.7.4.13}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:18, 18 March 2021

Reaction DCTUP

  • direction:
    • left-to-right
  • common-name:
    • dctp:uridine 5'-phosphotransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=DCTUP&oldid=139923"