Difference between revisions of "DCTUP"

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(Created page with "Category:reaction == Reaction AGMATIN-RXN == * direction: ** left-to-right * common-name: ** agmatinase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.3.11 ec-3.5.3.11]...")
(Created page with "Category:reaction == Reaction DCTUP == * direction: ** left-to-right * common-name: ** dctp:uridine 5'-phosphotransferase == Reaction formula == * 1.0 DCTP[c] '''+'''...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction AGMATIN-RXN ==
+
== Reaction DCTUP ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** agmatinase
+
** dctp:uridine 5'-phosphotransferase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.5.3.11 ec-3.5.3.11]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AGMATHINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PUTRESCINE]][c] '''+''' 1 [[UREA]][c]
+
* 1.0 [[DCTP]][c] '''+''' 1.0 [[URIDINE]][c] '''=>''' 1.0 [[DCDP]][c] '''+''' 1.0 [[PROTON]][c] '''+''' 1.0 [[UMP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00773]]
+
* Gene: [[SJ02034]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ15690]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6305]], superpathway of putrescine biosynthesis:
 
−
** '''4''' reactions found over '''n.a''' reactions in the full pathway
 
−
* [[PWY0-823]], L-arginine degradation III (arginine decarboxylase/agmatinase pathway):
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-40]], putrescine biosynthesis I:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR95554
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13929 13929]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01157 R01157]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P60654 P60654]
 
−
** [http://www.uniprot.org/uniprot/P60653 P60653]
 
−
** [http://www.uniprot.org/uniprot/P60651 P60651]
 
−
** [http://www.uniprot.org/uniprot/Q57757 Q57757]
 
−
** [http://www.uniprot.org/uniprot/P73270 P73270]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=agmatinase}}
+
{{#set: common-name=dctp:uridine 5'-phosphotransferase}}
−
{{#set: ec-number=ec-3.5.3.11}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=3}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:18, 18 March 2021

Reaction DCTUP

  • direction:
    • left-to-right
  • common-name:
    • dctp:uridine 5'-phosphotransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=DCTUP&oldid=139923"