Difference between revisions of "DEOXYADENYLATE-KINASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14136 RXN-14136] == * direction: ** left-to-right * common-name: ** glycerophosphoserine phosph...")
(Created page with "Category:reaction == Reaction RXN-11832 == * direction: ** left-to-right * common-name: ** cmp kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.14 ec-2.7.4.14] **...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14136 RXN-14136] ==
+
== Reaction RXN-11832 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glycerophosphoserine phosphodiesterase
+
** cmp kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.4.46 ec-3.1.4.46]
+
** [http://enzyme.expasy.org/EC/2.7.4.14 ec-2.7.4.14]
 +
** [http://enzyme.expasy.org/EC/2.7.4.25 ec-2.7.4.25]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD0-2030]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SER]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16458]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ21099]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ00999]]
+
* Gene: [[SJ21967]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08159]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ20076]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ01032]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7205]], CMP phosphorylation:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29878 29878]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11600 11600]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/O59845 O59845]
 +
** [http://www.uniprot.org/uniprot/Q29561 Q29561]
 +
** [http://www.uniprot.org/uniprot/P43892 P43892]
 +
** [http://www.uniprot.org/uniprot/Q58071 Q58071]
 +
** [http://www.uniprot.org/uniprot/Q9CEY1 Q9CEY1]
 +
** [http://www.uniprot.org/uniprot/P57064 P57064]
 +
** [http://www.uniprot.org/uniprot/P0A6I0 P0A6I0]
 +
** [http://www.uniprot.org/uniprot/P47572 P47572]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00512 R00512]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glycerophosphoserine phosphodiesterase}}
+
{{#set: common-name=cmp kinase}}
−
{{#set: ec-number=ec-3.1.4.46}}
+
{{#set: ec-number=ec-2.7.4.25|ec-2.7.4.14}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:40, 18 December 2020

Reaction RXN-11832

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7205, CMP phosphorylation:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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