Difference between revisions of "DEOXYXYLULOSE-5P"

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(Created page with "Category:gene == Gene SJ11815 == * transcription-direction: ** negative * right-end-position: ** 318368 * left-end-position: ** 310584 * centisome-position: ** 84.72521...")
(Created page with "Category:metabolite == Metabolite DEOXYXYLULOSE-5P == * common-name: ** 1-deoxy-d-xylulose 5-phosphate * smiles: ** cc(=o)c(o)c(o)cop([o-])(=o)[o-] * inchi-key: ** ajpadpz...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ11815 ==
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== Metabolite DEOXYXYLULOSE-5P ==
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* transcription-direction:
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* common-name:
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** negative
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** 1-deoxy-d-xylulose 5-phosphate
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* right-end-position:
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* smiles:
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** 318368
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** cc(=o)c(o)c(o)cop([o-])(=o)[o-]
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* left-end-position:
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* inchi-key:
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** 310584
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** ajpadpzsrrughi-rfzpgflssa-l
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* centisome-position:
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* molecular-weight:
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** 84.72521   
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** 212.096
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[DXPREDISOM-RXN]]
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== Reaction(s) associated ==
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* [[THIAZOLSYN2-RXN]]
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* [[6PGLUCONDEHYDROG-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[DXPREDISOM-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[DXS-RXN]]
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* [[PYRROLINECARBREDUCT-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=1-deoxy-d-xylulose 5-phosphate}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=ajpadpzsrrughi-rfzpgflssa-l}}
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** Category: [[orthology]]
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{{#set: molecular-weight=212.096}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-9952]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN66-546]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[P122-PWY]]
 
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** '''16''' reactions found over '''18''' reactions in the full pathway
 
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* [[PWY-3341]]
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
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* [[PROSYN-PWY]]
 
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-6344]]
 
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** '''2''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-4981]]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[ARG-PRO-PWY]]
 
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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* [[OXIDATIVEPENT-PWY]]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=318368}}
 
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{{#set: left-end-position=310584}}
 
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{{#set: centisome-position=84.72521    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=4}}
 
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{{#set: nb pathway associated=7}}
 

Latest revision as of 11:13, 18 March 2021

Metabolite DEOXYXYLULOSE-5P

  • common-name:
    • 1-deoxy-d-xylulose 5-phosphate
  • smiles:
    • cc(=o)c(o)c(o)cop([o-])(=o)[o-]
  • inchi-key:
    • ajpadpzsrrughi-rfzpgflssa-l
  • molecular-weight:
    • 212.096

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=DEOXYXYLULOSE-5P&oldid=137559"