Difference between revisions of "DGDPKIN-RXN"

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(Created page with "Category:reaction == Reaction RXN-1884 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.316 ec-1.1.1.316] == Reaction formula == * 1 L...")
(Created page with "Category:reaction == Reaction 1.1.1.272-RXN == * direction: ** reversible * common-name: ** (d)-2-hydroxyacid dehydrogenase (nadp+) * ec-number: ** [http://enzyme.expasy.o...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-1884 ==
+
== Reaction 1.1.1.272-RXN ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 +
* common-name:
 +
** (d)-2-hydroxyacid dehydrogenase (nadp+)
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.1.1.316 ec-1.1.1.316]
+
** [http://enzyme.expasy.org/EC/1.1.1.272 ec-1.1.1.272]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[L-Galactopyranose]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-330]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[D-2-hydroxyacids]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[2-Oxo-carboxylates]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ12807]]
+
* Gene: [[SJ15896]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ20690]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ07048]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ15799]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ20140]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway):
 
** '''6''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31562 31562]
+
{{#set: common-name=(d)-2-hydroxyacid dehydrogenase (nadp+)}}
* LIGAND-RXN:
+
{{#set: ec-number=ec-1.1.1.272}}
** [http://www.genome.jp/dbget-bin/www_bget?R07675 R07675]
+
{{#set: nb gene associated=1}}
{{#set: direction=left-to-right}}
+
{{#set: nb pathway associated=0}}
{{#set: ec-number=ec-1.1.1.316}}
+
{{#set: reconstruction category=annotation}}
{{#set: nb gene associated=5}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:17, 14 January 2021

Reaction 1.1.1.272-RXN

  • direction:
    • reversible
  • common-name:
    • (d)-2-hydroxyacid dehydrogenase (nadp+)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links