Difference between revisions of "DGOTO"

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(Created page with "Category:reaction == Reaction RXN0-5183 == * direction: ** left-to-right * common-name: ** alpha-1,4-glucosidase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.20 ec-3...")
(Created page with "Category:reaction == Reaction DGOTO == * direction: ** left-to-right * common-name: ** 2'-deoxyguanosine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase == Reaction...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-5183 ==
+
== Reaction DGOTO ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** alpha-1,4-glucosidase
+
** 2'-deoxyguanosine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.2.1.20 ec-3.2.1.20]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MALTOTRIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[MALTOSE]][c]
+
* 1.0 [[GDP]][c] '''+''' 1.0 [[Red-Thioredoxin]][c] '''=>''' 1.0 [[DGDP]][c] '''+''' 1.0 [[Ox-Thioredoxin]][c] '''+''' 1.0 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09229]]
+
* Gene: [[SJ17066]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ02824]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20354]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLYCOCAT-PWY]], glycogen degradation I:
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR101619
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27971 27971]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R05196 R05196]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=alpha-1,4-glucosidase}}
+
{{#set: common-name=2'-deoxyguanosine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase}}
−
{{#set: ec-number=ec-3.2.1.20}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:19, 18 March 2021

Reaction DGOTO

  • direction:
    • left-to-right
  • common-name:
    • 2'-deoxyguanosine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=DGOTO&oldid=140429"