Difference between revisions of "DGOTO"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-MEBUCOA-FAD-RXN 2-MEBUCOA-FAD-RXN] == * direction: ** reversible * ec-number: ** [http://enzyme.e...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.23-RXN 3.2.1.23-RXN] == * direction: ** left-to-right * common-name: ** β-galactosidase...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-MEBUCOA-FAD-RXN 2-MEBUCOA-FAD-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.23-RXN 3.2.1.23-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** β-galactosidase
 +
** beta-galactosidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.99.12 ec-1.3.99.12]
+
** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23]
−
* synonymous:
 
−
** branched-chain acyl-coa dehydrogenase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-METHYL-BUTYRYL-COA]][c] '''+''' 1 [[Acceptor]][c] '''<=>''' 1 [[CPD-1083]][c] '''+''' 1 [[Donor-H2]][c]
+
* 1 [[Beta-D-Galactosides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[Non-Galactosylated-Galactose-Acceptors]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21233]]
+
* Gene: [[SJ04558]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ14193]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03139]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10277]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: ec-number=ec-1.3.99.12}}
+
* UNIPROT:
−
{{#set: synonymous=branched-chain acyl-coa dehydrogenase}}
+
** [http://www.uniprot.org/uniprot/P06219 P06219]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/P11175 P11175]
 +
** [http://www.uniprot.org/uniprot/P19668 P19668]
 +
** [http://www.uniprot.org/uniprot/P20043 P20043]
 +
** [http://www.uniprot.org/uniprot/P16278 P16278]
 +
** [http://www.uniprot.org/uniprot/P23780 P23780]
 +
** [http://www.uniprot.org/uniprot/P24131 P24131]
 +
** [http://www.uniprot.org/uniprot/Q02603 Q02603]
 +
** [http://www.uniprot.org/uniprot/Q53790 Q53790]
 +
** [http://www.uniprot.org/uniprot/P23989 P23989]
 +
** [http://www.uniprot.org/uniprot/P48982 P48982]
 +
** [http://www.uniprot.org/uniprot/Q9UYG5 Q9UYG5]
 +
** [http://www.uniprot.org/uniprot/Q02604 Q02604]
 +
** [http://www.uniprot.org/uniprot/P0AC73 P0AC73]
 +
** [http://www.uniprot.org/uniprot/O58247 O58247]
 +
** [http://www.uniprot.org/uniprot/Q9UYH2 Q9UYH2]
 +
** [http://www.uniprot.org/uniprot/P00722 P00722]
 +
** [http://www.uniprot.org/uniprot/P06864 P06864]
 +
** [http://www.uniprot.org/uniprot/Q47170 Q47170]
 +
** [http://www.uniprot.org/uniprot/Q59140 Q59140]
 +
** [http://www.uniprot.org/uniprot/P00723 P00723]
 +
** [http://www.uniprot.org/uniprot/P94248 P94248]
 +
** [http://www.uniprot.org/uniprot/O31341 O31341]
 +
** [http://www.uniprot.org/uniprot/P22498 P22498]
 +
** [http://www.uniprot.org/uniprot/Q02401 Q02401]
 +
** [http://www.uniprot.org/uniprot/P26257 P26257]
 +
** [http://www.uniprot.org/uniprot/Q59422 Q59422]
 +
** [http://www.uniprot.org/uniprot/P30812 P30812]
 +
** [http://www.uniprot.org/uniprot/Q12660 Q12660]
 +
** [http://www.uniprot.org/uniprot/P45582 P45582]
 +
** [http://www.uniprot.org/uniprot/P49676 P49676]
 +
** [http://www.uniprot.org/uniprot/Q9SCV3 Q9SCV3]
 +
** [http://www.uniprot.org/uniprot/Q9SZI5 Q9SZI5]
 +
** [http://www.uniprot.org/uniprot/O81100 O81100]
 +
** [http://www.uniprot.org/uniprot/Q42150 Q42150]
 +
** [http://www.uniprot.org/uniprot/P48980 P48980]
 +
** [http://www.uniprot.org/uniprot/P48981 P48981]
 +
** [http://www.uniprot.org/uniprot/O86616 O86616]
 +
** [http://www.uniprot.org/uniprot/P70753 P70753]
 +
** [http://www.uniprot.org/uniprot/P29853 P29853]
 +
** [http://www.uniprot.org/uniprot/P94804 P94804]
 +
</div>
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=&beta;-galactosidase|beta-galactosidase}}
 +
{{#set: ec-number=ec-3.2.1.23}}
 +
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:26, 26 August 2019

Reaction 3.2.1.23-RXN

  • direction:
    • left-to-right
  • common-name:
    • β-galactosidase
    • beta-galactosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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