Difference between revisions of "DHHB-METHYLTRANSFER-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] == * direction: ** left-to-right * common-name: ** riboflavin...")
(Created page with "Category:reaction == Reaction DHHB-METHYLTRANSFER-RXN == * direction: ** left-to-right * common-name: ** 3-demethylubiquinone-8 3-o-methyltransferase * ec-number: ** [http...")
 
(8 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] ==
+
== Reaction DHHB-METHYLTRANSFER-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** riboflavin kinase
+
** 3-demethylubiquinone-8 3-o-methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.26 ec-2.7.1.26]
+
** [http://enzyme.expasy.org/EC/2.1.1.64 ec-2.1.1.64]
 +
* synonymous:
 +
** 5-demethylubiquinone-8 methyltransferase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[RIBOFLAVIN]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[FMN]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[OCTAPRENYL-METHYL-OH-METHOXY-BENZQ]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9956]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19426]]
+
* Gene: [[SJ16864]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07922]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ13007]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01760]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
+
* [[PWY-6708]], ubiquinol-8 biosynthesis (early decarboxylation):
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
+
* [[PWY-5870]], ubiquinol-8 biosynthesis (late decarboxylation):
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7863]], roseoflavin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7863 PWY-7863]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5523]], 5,6-dimethylbenzimidazole biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR97527
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14358 14358]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28680 28680]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00549 R00549]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
+
** [http://www.uniprot.org/uniprot/P17993 P17993]
−
** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
+
** [http://www.uniprot.org/uniprot/Q9JWE6 Q9JWE6]
−
** [http://www.uniprot.org/uniprot/Q59263 Q59263]
+
** [http://www.uniprot.org/uniprot/Q9ZCT9 Q9ZCT9]
 +
** [http://www.uniprot.org/uniprot/P37431 P37431]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=riboflavin kinase}}
+
{{#set: common-name=3-demethylubiquinone-8 3-o-methyltransferase}}
−
{{#set: ec-number=ec-2.7.1.26}}
+
{{#set: ec-number=ec-2.1.1.64}}
−
{{#set: nb gene associated=3}}
+
{{#set: synonymous=5-demethylubiquinone-8 methyltransferase}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction DHHB-METHYLTRANSFER-RXN

  • direction:
    • left-to-right
  • common-name:
    • 3-demethylubiquinone-8 3-o-methyltransferase
  • ec-number:
  • synonymous:
    • 5-demethylubiquinone-8 methyltransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6708, ubiquinol-8 biosynthesis (early decarboxylation):
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-5870, ubiquinol-8 biosynthesis (late decarboxylation):
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links






Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=DHHB-METHYLTRANSFER-RXN&oldid=140274"