Difference between revisions of "DHRT LPAREN 2mbcoa RPAREN"

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(Created page with "Category:reaction == Reaction RXN-7163 == * direction: ** left-to-right * common-name: ** inositol-1,3,4,5,6-pentakisphosphate 2-kinase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction CYSPH-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1] == Reaction formula == * 1 CYS[c]...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7163 ==
+
== Reaction CYSPH-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** inositol-1,3,4,5,6-pentakisphosphate 2-kinase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.158 ec-2.7.1.158]
+
** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CPD-1107]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[MI-HEXAKISPHOSPHATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CYS]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21412]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ22245]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6554]], 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3):
+
* [[PWY-702]], L-methionine biosynthesis II:
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** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-4661]], 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza):
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6372]], 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium):
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6361]], 1D-myo-inositol hexakisphosphate biosynthesis I (from Ins(1,4,5)P3):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6362]], 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6369]], inositol diphosphates biosynthesis:
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR97021
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20314 20314]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R05202 R05202]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=inositol-1,3,4,5,6-pentakisphosphate 2-kinase}}
+
{{#set: ec-number=ec-2.5.1}}
−
{{#set: ec-number=ec-2.7.1.158}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=6}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 08:35, 15 March 2021

Reaction CYSPH-RXN

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-702, L-methionine biosynthesis II:
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR97021





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