Difference between revisions of "DI-H-OROTATE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.6.5.4-RXN 1.6.5.4-RXN] == * direction: ** left-to-right * common-name: ** nadh-monodehydroascorba...")
(Created page with "Category:gene == Gene SJ08338 == * transcription-direction: ** positive * right-end-position: ** 362595 * left-end-position: ** 345792 * centisome-position: ** 78.30683...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.6.5.4-RXN 1.6.5.4-RXN] ==
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== Gene SJ08338 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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* common-name:
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* right-end-position:
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** nadh-monodehydroascorbate reductase
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** 362595
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* ec-number:
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* left-end-position:
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** [http://enzyme.expasy.org/EC/1.6.5.4 ec-1.6.5.4]
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** 345792
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== Reaction formula ==
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* centisome-position:
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* 2 [[CPD-318]][c] '''+''' 1 [[NADH]][c] '''=>''' 2 [[ASCORBATE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PROTON]][c]
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** 78.30683   
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[SJ04254]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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* [[3.4.24.56-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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{{#set: transcription-direction=positive}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: right-end-position=362595}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: left-end-position=345792}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: centisome-position=78.30683    }}
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* Gene: [[SJ15624]]
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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** Category: [[annotation]]
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{{#set: nb reaction associated=1}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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== Pathway(s)  ==
 
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* [[PWY-6370]], ascorbate recycling (cytosolic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6370 PWY-6370]
 
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** '''2''' reactions found over '''6''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14582 14582]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00095 R00095]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q9S926 Q9S926]
 
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** [http://www.uniprot.org/uniprot/Q40977 Q40977]
 
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** [http://www.uniprot.org/uniprot/Q42711 Q42711]
 
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** [http://www.uniprot.org/uniprot/Q43497 Q43497]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=nadh-monodehydroascorbate reductase}}
 
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{{#set: ec-number=ec-1.6.5.4}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Revision as of 09:28, 27 August 2019

Gene SJ08338

  • transcription-direction:
    • positive
  • right-end-position:
    • 362595
  • left-end-position:
    • 345792
  • centisome-position:
    • 78.30683

Organism(s) associated with this gene

Reaction(s) associated




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