Difference between revisions of "DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17014 RXN-17014] == * direction: ** left-to-right * common-name: ** 1-acylglycerol-3-phosphate...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPERMIDINESYN-RXN SPERMIDINESYN-RXN] == * direction: ** reversible * common-name: ** spermidine syn...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17014 RXN-17014] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPERMIDINESYN-RXN SPERMIDINESYN-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 1-acylglycerol-3-phosphate o-acyltransferase
+
** spermidine synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.51 ec-2.3.1.51]
+
** [http://enzyme.expasy.org/EC/2.5.1.16 ec-2.5.1.16]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[1-PALMITOYLGLYCEROL-3-PHOSPHATE]][c] '''+''' 1 [[Cis-vaccenoyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CPD-18352]][c]
+
* 1 [[PUTRESCINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''<=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SPERMIDINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ05219]]
−
* Gene: [[SJ13801]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ09888]]
+
* Gene: [[SJ19088]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ13501]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ20565]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01857]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ15136]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13643]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ08831]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10647]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ18009]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
* RHEA:
−
{{#set: common-name=1-acylglycerol-3-phosphate o-acyltransferase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12724 12724]
−
{{#set: ec-number=ec-2.3.1.51}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=10}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01920 R01920]
−
{{#set: nb pathway associated=0}}
+
* UNIPROT:
−
{{#set: reconstruction category=orthology|annotation}}
+
** [http://www.uniprot.org/uniprot/P19623 P19623]
 +
** [http://www.uniprot.org/uniprot/Q57761 Q57761]
 +
** [http://www.uniprot.org/uniprot/Q12074 Q12074]
 +
** [http://www.uniprot.org/uniprot/Q12455 Q12455]
 +
** [http://www.uniprot.org/uniprot/P09158 P09158]
 +
** [http://www.uniprot.org/uniprot/O48660 O48660]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=spermidine synthase}}
 +
{{#set: ec-number=ec-2.5.1.16}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}

Revision as of 09:31, 27 August 2019

Reaction SPERMIDINESYN-RXN

  • direction:
    • reversible
  • common-name:
    • spermidine synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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