Difference between revisions of "DIAMINOPIMDECARB-RXN"

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(Created page with "Category:reaction == Reaction RXN-5286 == * direction: ** left-to-right * common-name: ** 3,8-divinyl-chlorophyllide 8-vinyl reductase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction RXN-17875 == * direction: ** left-to-right * common-name: ** methionine aminopeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.11.18...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-5286 ==
+
== Reaction RXN-17875 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3,8-divinyl-chlorophyllide 8-vinyl reductase
+
** methionine aminopeptidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.1.75 ec-1.3.1.75]
+
** [http://enzyme.expasy.org/EC/3.4.11.18 ec-3.4.11.18]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DIVINYLCHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[L-methionyl-glycyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[N-terminal-glycine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12431]]
+
* Gene: [[SJ16939]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ18138]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ01604]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16932]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16573]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02903]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5086]], chlorophyll a biosynthesis I:
+
* [[PWY-7800]], Ac/N-end rule pathway:
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''21''' reactions in the full pathway
−
* [[PWY-7760]], bacteriochlorophyll e biosynthesis:
 
−
** '''1''' reactions found over '''30''' reactions in the full pathway
 
−
* [[PWY-7758]], bacteriochlorophyll d biosynthesis:
 
−
** '''1''' reactions found over '''14''' reactions in the full pathway
 
−
* [[PWY-7759]], bacteriochlorophyll c biosynthesis:
 
−
** '''1''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5064]], chlorophyll a biosynthesis II:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5526]], bacteriochlorophyll a biosynthesis:
 
−
** '''5''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR121227
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14451 14451]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R06272 R06272]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3,8-divinyl-chlorophyllide 8-vinyl reductase}}
+
{{#set: common-name=methionine aminopeptidase}}
−
{{#set: ec-number=ec-1.3.1.75}}
+
{{#set: ec-number=ec-3.4.11.18}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:36, 15 March 2021

Reaction RXN-17875

  • direction:
    • left-to-right
  • common-name:
    • methionine aminopeptidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7800, Ac/N-end rule pathway:
    • 6 reactions found over 21 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR121227





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