Difference between revisions of "DIAMINOPIMELATE-DEHYDROGENASE-RXN"

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(Created page with "Category:reaction == Reaction GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN == * direction: ** reversible * common-name: ** d-glucose 6-phosphate 1-epimerase * ec-number: ** [http:/...")
(Created page with "Category:reaction == Reaction DIAMINOPIMELATE-DEHYDROGENASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.4.1.16 ec-1.4.1.16] == Reactio...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN ==
+
== Reaction DIAMINOPIMELATE-DEHYDROGENASE-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
* common-name:
 
** d-glucose 6-phosphate 1-epimerase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/5.1.3.15 ec-5.1.3.15]
+
** [http://enzyme.expasy.org/EC/1.4.1.16 ec-1.4.1.16]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ALPHA-GLC-6-P]][c] '''<=>''' 1 [[GLC-6-P]][c]
+
* 1 [[MESO-DIAMINOPIMELATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[L-ALPHA-AMINO-EPSILON-KETO-PIMELATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ08179]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ19646]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ02068]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ00085]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-2942]], L-lysine biosynthesis III:
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[previous_meneco]]; tool: [[curation]]; comment: reaction added with meneco (previous version)
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR107706
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16252 16252]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13564 13564]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R02739 R02739]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02755 R02755]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P04964 P04964]
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: common-name=d-glucose 6-phosphate 1-epimerase}}
+
{{#set: ec-number=ec-1.4.1.16}}
{{#set: ec-number=ec-5.1.3.15}}
+
{{#set: nb gene associated=0}}
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction comment=reaction added with meneco (previous version)}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=previous_meneco}}
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
 

Latest revision as of 11:20, 18 March 2021

Reaction DIAMINOPIMELATE-DEHYDROGENASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2942, L-lysine biosynthesis III:
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links