Difference between revisions of "DIENOYLCOAREDUCT-RXN"
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(Created page with "Category:reaction == Reaction DGTCY == * direction: ** left-to-right * common-name: ** dgtp:cytidine 5'-phosphotransferase == Reaction formula == * 1.0 CYTIDINE[c] '''...") |
(Created page with "Category:reaction == Reaction PYRIDOXKIN-RXN == * direction: ** left-to-right * common-name: ** pyridoxal kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.35 ec-2...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction PYRIDOXKIN-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** pyridoxal kinase |
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.7.1.35 ec-2.7.1.35] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 | + | * 1 [[ATP]][c] '''+''' 1 [[PYRIDOXAL]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ14436]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | *** Source: [[ | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | * Gene: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| + | * Gene: [[SJ08289]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7282]], 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis: | ||
| + | ** '''6''' reactions found over '''10''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10225 10225] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00174 R00174] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/Q7M2L1 Q7M2L1] | ||
| + | ** [http://www.uniprot.org/uniprot/P44690 P44690] | ||
| + | ** [http://www.uniprot.org/uniprot/P77150 P77150] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=pyridoxal kinase}} |
| + | {{#set: ec-number=ec-2.7.1.35}} | ||
{{#set: nb gene associated=2}} | {{#set: nb gene associated=2}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 11:25, 15 January 2021
Contents
Reaction PYRIDOXKIN-RXN
- direction:
- left-to-right
- common-name:
- pyridoxal kinase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 PYRIDOXAL[c] => 1 ADP[c] + 1 PROTON[c] + 1 PYRIDOXAL_PHOSPHATE[c]
Gene(s) associated with this reaction
- Gene: SJ14436
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ08289
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PLPSAL-PWY, pyridoxal 5'-phosphate salvage I:
- 5 reactions found over 5 reactions in the full pathway
- PWY-7204, pyridoxal 5'-phosphate salvage II (plants):
- 9 reactions found over 9 reactions in the full pathway
- PWY-7282, 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis:
- 6 reactions found over 10 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links
