Difference between revisions of "DIHYDROFOLATE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTMPKI-RXN DTMPKI-RXN] == * direction: ** left-to-right * common-name: ** dtmp kinase * ec-number:...")
(Created page with "Category:metabolite == Metabolite DIHYDROFOLATE == * common-name: ** 7,8-dihydrofolate monoglutamate * smiles: ** c(nc1(c=cc(c(=o)nc(c(=o)[o-])ccc([o-])=o)=cc=1))c3(cnc2(=...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTMPKI-RXN DTMPKI-RXN] ==
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== Metabolite DIHYDROFOLATE ==
* direction:
 
** left-to-right
 
 
* common-name:
 
* common-name:
** dtmp kinase
+
** 7,8-dihydrofolate monoglutamate
* ec-number:
+
* smiles:
** [http://enzyme.expasy.org/EC/2.7.4.12 ec-2.7.4.12]
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** c(nc1(c=cc(c(=o)nc(c(=o)[o-])ccc([o-])=o)=cc=1))c3(cnc2(=c(c(=o)nc(n)=n2)n=3))
** [http://enzyme.expasy.org/EC/2.7.4.13 ec-2.7.4.13]
+
* inchi-key:
** [http://enzyme.expasy.org/EC/2.7.4.9 ec-2.7.4.9]
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** ozrnssudzolusn-lbprgkrzsa-l
== Reaction formula ==
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* molecular-weight:
* 1 [[ATP]][c] '''+''' 1 [[TMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[TDP]][c]
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** 441.402
== Gene(s) associated with this reaction  ==
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== Reaction(s) known to consume the compound ==
* Gene: [[SJ01455]]
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* [[DHFR2i]]
** Category: [[annotation]]
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* [[DHFRi]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[MDUMT]]
** Category: [[orthology]]
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== Reaction(s) known to produce the compound ==
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[DHFOR]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[DIHYDROFOLATESYNTH-RXN]]
== Pathway(s) ==
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* [[FOLR2]]
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
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* [[MDUMT]]
** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reaction(s) of unknown directionality ==
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
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{{#set: common-name=7,8-dihydrofolate monoglutamate}}
** '''8''' reactions found over '''9''' reactions in the full pathway
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{{#set: inchi-key=inchikey=ozrnssudzolusn-lbprgkrzsa-l}}
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187]
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{{#set: molecular-weight=441.402}}
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
 
** '''14''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7197 PWY-7197]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13518 13518]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02094 R02094]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/Q57741 Q57741]
 
** [http://www.uniprot.org/uniprot/Q9PPF3 Q9PPF3]
 
** [http://www.uniprot.org/uniprot/P0A720 P0A720]
 
** [http://www.uniprot.org/uniprot/Q8X8H7 Q8X8H7]
 
** [http://www.uniprot.org/uniprot/Q9JVE7 Q9JVE7]
 
** [http://www.uniprot.org/uniprot/P33803 P33803]
 
** [http://www.uniprot.org/uniprot/P42490 P42490]
 
** [http://www.uniprot.org/uniprot/P00572 P00572]
 
** [http://www.uniprot.org/uniprot/Q80HT9 Q80HT9]
 
** [http://www.uniprot.org/uniprot/P68693 P68693]
 
** [http://www.uniprot.org/uniprot/P23919 P23919]
 
** [http://www.uniprot.org/uniprot/P36590 P36590]
 
** [http://www.uniprot.org/uniprot/Q9RA29 Q9RA29]
 
** [http://www.uniprot.org/uniprot/O81650 O81650]
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=dtmp kinase}}
 
{{#set: ec-number=ec-2.7.4.12|ec-2.7.4.9|ec-2.7.4.13}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=7}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite DIHYDROFOLATE

  • common-name:
    • 7,8-dihydrofolate monoglutamate
  • smiles:
    • c(nc1(c=cc(c(=o)nc(c(=o)[o-])ccc([o-])=o)=cc=1))c3(cnc2(=c(c(=o)nc(n)=n2)n=3))
  • inchi-key:
    • ozrnssudzolusn-lbprgkrzsa-l
  • molecular-weight:
    • 441.402

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality