Difference between revisions of "DIHYDROOROT-RXN"

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(Created page with "Category:reaction == Reaction PPENTOMUT-RXN == * direction: ** reversible * common-name: ** α-d-ribose 1,5-phosphomutase * ec-number: ** [http://enzyme.expasy.org/EC...")
(Created page with "Category:reaction == Reaction RXN-16401 == * direction: ** left-to-right * common-name: ** long-chain fatty acid-coa ligase * ec-number: ** [http://enzyme.expasy.org/EC/6....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PPENTOMUT-RXN ==
+
== Reaction RXN-16401 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** α-d-ribose 1,5-phosphomutase
+
** long-chain fatty acid-coa ligase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.4.2.7 ec-5.4.2.7]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[RIBOSE-1P]][c] '''<=>''' 1 [[RIBOSE-5P]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17640]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-17641]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05004]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ08690]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13972]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08691]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05591]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ08692]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03650]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-661]]:
+
* [[PWY-6733]], sporopollenin precursors biosynthesis:
−
** '''1''' reactions found over '''n.a''' reactions in the full pathway
+
** '''8''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY0-1296]], purine ribonucleosides degradation:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR120055
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18796 18796]
+
{{#set: direction=left-to-right}}
−
* LIGAND-RXN:
+
{{#set: common-name=long-chain fatty acid-coa ligase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01057 R01057]
+
{{#set: ec-number=ec-6.2.1.3}}
−
* UNIPROT:
+
{{#set: nb gene associated=6}}
−
** [http://www.uniprot.org/uniprot/Q9CH12 Q9CH12]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/O24821 O24821]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/P0A6K6 P0A6K6]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=&alpha;-d-ribose 1,5-phosphomutase}}
 
−
{{#set: ec-number=ec-5.4.2.7}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:39, 15 March 2021

Reaction RXN-16401

  • direction:
    • left-to-right
  • common-name:
    • long-chain fatty acid-coa ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6733, sporopollenin precursors biosynthesis:
    • 8 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR120055





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