Difference between revisions of "DIHYDROOROT-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5115 PWY-5115] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3193 tax-31...")
(Created page with "Category:reaction == Reaction DIHYDROOROT-RXN == * direction: ** reversible * common-name: ** dihydroorotase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.2.3 ec-3.5.2....")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5115 PWY-5115] ==
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== Reaction DIHYDROOROT-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3193 tax-3193]
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** reversible
 
* common-name:
 
* common-name:
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** gdp-l-galactose biosynthesis
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** dihydroorotase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-1882]]
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** [http://enzyme.expasy.org/EC/3.5.2.3 ec-3.5.2.3]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7771 RXN-7771]
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* 1 [[DI-H-OROTATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CARBAMYUL-L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c]
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{{#set: taxonomic-range=tax-3193}}
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== Gene(s) associated with this reaction  ==
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{{#set: common-name=gdp-l-galactose biosynthesis}}
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* Gene: [[SJ17851]]
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{{#set: nb reaction found=1}}
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** Category: [[annotation]]
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{{#set: completion rate=0.5}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb total reaction=2}}
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* Gene: [[SJ19150]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ15949]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) ==
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* [[PWY-5686]], UMP biosynthesis I:
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7790]], UMP biosynthesis II:
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7791]], UMP biosynthesis III:
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR97428
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24299 24299]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01993 R01993]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P08955 P08955]
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** [http://www.uniprot.org/uniprot/P27708 P27708]
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** [http://www.uniprot.org/uniprot/Q91437 Q91437]
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** [http://www.uniprot.org/uniprot/Q58885 Q58885]
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** [http://www.uniprot.org/uniprot/Q9PIN6 Q9PIN6]
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** [http://www.uniprot.org/uniprot/P25995 P25995]
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** [http://www.uniprot.org/uniprot/P20051 P20051]
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** [http://www.uniprot.org/uniprot/P06204 P06204]
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** [http://www.uniprot.org/uniprot/P05020 P05020]
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** [http://www.uniprot.org/uniprot/P31301 P31301]
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** [http://www.uniprot.org/uniprot/Q9PNA0 Q9PNA0]
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** [http://www.uniprot.org/uniprot/Q9JVD6 Q9JVD6]
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** [http://www.uniprot.org/uniprot/P46538 P46538]
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** [http://www.uniprot.org/uniprot/P20054 P20054]
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** [http://www.uniprot.org/uniprot/P05990 P05990]
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** [http://www.uniprot.org/uniprot/Q06950 Q06950]
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** [http://www.uniprot.org/uniprot/P72934 P72934]
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** [http://www.uniprot.org/uniprot/P74438 P74438]
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** [http://www.uniprot.org/uniprot/O04904 O04904]
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** [http://www.uniprot.org/uniprot/P72170 P72170]
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** [http://www.uniprot.org/uniprot/O76138 O76138]
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** [http://www.uniprot.org/uniprot/O27199 O27199]
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** [http://www.uniprot.org/uniprot/P48795 P48795]
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</div>
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{{#set: direction=reversible}}
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{{#set: common-name=dihydroorotase}}
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{{#set: ec-number=ec-3.5.2.3}}
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{{#set: nb gene associated=3}}
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{{#set: nb pathway associated=3}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction DIHYDROOROT-RXN

  • direction:
    • reversible
  • common-name:
    • dihydroorotase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5686, UMP biosynthesis I:
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7790, UMP biosynthesis II:
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7791, UMP biosynthesis III:
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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