Difference between revisions of "DIMETHUROPORDEHYDROG-RXN"

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(Created page with "Category:reaction == Reaction RXN-16016 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] == Reaction formula == * 1 ACETYL-C...")
(Created page with "Category:reaction == Reaction DIMETHUROPORDEHYDROG-RXN == * direction: ** left-to-right * common-name: ** precorrin-2 dehydrogenase * ec-number: ** [http://enzyme.expasy.o...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-16016 ==
+
== Reaction DIMETHUROPORDEHYDROG-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** precorrin-2 dehydrogenase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
+
** [http://enzyme.expasy.org/EC/1.3.1.76 ec-1.3.1.76]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ACETYL-COA]][c] '''+''' 9 [[MALONYL-COA]][c] '''+''' 14 [[NADPH]][c] '''+''' 22 [[PROTON]][c] '''=>''' 1 [[ARACHIDONIC_ACID]][c] '''+''' 9 [[CARBON-DIOXIDE]][c] '''+''' 10 [[CO-A]][c] '''+''' 14 [[NADP]][c] '''+''' 8 [[WATER]][c]
+
* 1 [[DIHYDROSIROHYDROCHLORIN]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SIROHYDROCHLORIN]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ12313]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7583]], arachidonate biosynthesis II (bacteria):
+
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5196]], factor 430 biosynthesis:
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5194]], siroheme biosynthesis:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR104373
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15613 15613]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03947 R03947]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-2.3.1}}
+
{{#set: common-name=precorrin-2 dehydrogenase}}
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-1.3.1.76}}
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=1}}
{{#set: reconstruction category=gap-filling}}
+
{{#set: nb pathway associated=3}}
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction DIMETHUROPORDEHYDROG-RXN

  • direction:
    • left-to-right
  • common-name:
    • precorrin-2 dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
    • 4 reactions found over 15 reactions in the full pathway
  • PWY-5196, factor 430 biosynthesis:
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5194, siroheme biosynthesis:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR104373
  • RHEA:
  • LIGAND-RXN: