Difference between revisions of "DIMETHUROPORDEHYDROG-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8317 RXN-8317] == * direction: ** left-to-right * common-name: ** 1-18:2-2-16:0-phosphatidylgly...")
(Created page with "Category:reaction == Reaction DIMETHUROPORDEHYDROG-RXN == * direction: ** left-to-right * common-name: ** precorrin-2 dehydrogenase * ec-number: ** [http://enzyme.expasy.o...")
 
(8 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8317 RXN-8317] ==
+
== Reaction DIMETHUROPORDEHYDROG-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 1-18:2-2-16:0-phosphatidylglycerol desaturase
+
** precorrin-2 dehydrogenase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.14.19.35 ec-1.14.19.35]
+
** [http://enzyme.expasy.org/EC/1.3.1.76 ec-1.3.1.76]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-8086]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD-8087]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[DIHYDROSIROHYDROCHLORIN]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SIROHYDROCHLORIN]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ09228]]
+
* Gene: [[SJ12313]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
* Gene: [[SJ03069]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-762]], phospholipid desaturation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-762 PWY-762]
+
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
** '''19''' reactions found over '''21''' reactions in the full pathway
+
** '''4''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5196]], factor 430 biosynthesis:
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5194]], siroheme biosynthesis:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR104373
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15613 15613]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03947 R03947]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=1-18:2-2-16:0-phosphatidylglycerol desaturase}}
+
{{#set: common-name=precorrin-2 dehydrogenase}}
{{#set: ec-number=ec-1.14.19.35}}
+
{{#set: ec-number=ec-1.3.1.76}}
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction DIMETHUROPORDEHYDROG-RXN

  • direction:
    • left-to-right
  • common-name:
    • precorrin-2 dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
    • 4 reactions found over 15 reactions in the full pathway
  • PWY-5196, factor 430 biosynthesis:
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5194, siroheme biosynthesis:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR104373
  • RHEA:
  • LIGAND-RXN: