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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] == | + | == Metabolite DNA-Containing-N6-Methyladenine == |
| − | * direction:
| |
| − | ** reversible
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| | * common-name: | | * common-name: |
| − | ** glutamate dehydrogenase | + | ** an n6-methyladenine in dna |
| − | * ec-number:
| + | == Reaction(s) known to consume the compound == |
| − | ** [http://enzyme.expasy.org/EC/1.4.1.4 ec-1.4.1.4]
| + | == Reaction(s) known to produce the compound == |
| − | == Reaction formula == | + | * [[2.1.1.72-RXN]] |
| − | * 1 [[GLT]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
| + | == Reaction(s) of unknown directionality == |
| − | == Gene(s) associated with this reaction ==
| + | {{#set: common-name=an n6-methyladenine in dna}} |
| − | * Gene: [[SJ10621]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | * Gene: [[SJ20190]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ10812]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ10813]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ20174]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | == Pathway(s) == | |
| − | * [[GLUTSYNIII-PWY]], L-glutamate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYNIII-PWY GLUTSYNIII-PWY] | |
| − | ** '''1''' reactions found over '''1''' reactions in the full pathway
| |
| − | * [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
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| − | ** '''4''' reactions found over '''4''' reactions in the full pathway
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| − | * [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
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| − | ** '''3''' reactions found over '''4''' reactions in the full pathway
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| − | * [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
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| − | ** '''10''' reactions found over '''11''' reactions in the full pathway
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| − | == Reconstruction information ==
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| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | == External links ==
| |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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| − | * RHEA:
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| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11615 11615]
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| − | * LIGAND-RXN:
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| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00248 R00248]
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| − | * UNIPROT:
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| − | ** [http://www.uniprot.org/uniprot/P07262 P07262]
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| − | ** [http://www.uniprot.org/uniprot/P15111 P15111]
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| − | ** [http://www.uniprot.org/uniprot/P28724 P28724]
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| − | ** [http://www.uniprot.org/uniprot/P43793 P43793]
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| − | ** [http://www.uniprot.org/uniprot/Q9JT56 Q9JT56]
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| − | ** [http://www.uniprot.org/uniprot/P00370 P00370]
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| − | ** [http://www.uniprot.org/uniprot/P00369 P00369]
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| − | ** [http://www.uniprot.org/uniprot/P29507 P29507]
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| − | ** [http://www.uniprot.org/uniprot/P28998 P28998]
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| − | ** [http://www.uniprot.org/uniprot/P29051 P29051]
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| − | ** [http://www.uniprot.org/uniprot/P31026 P31026]
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| − | ** [http://www.uniprot.org/uniprot/P39475 P39475]
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| − | ** [http://www.uniprot.org/uniprot/P39708 P39708]
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| − | ** [http://www.uniprot.org/uniprot/P54387 P54387]
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| − | ** [http://www.uniprot.org/uniprot/P54386 P54386]
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| − | ** [http://www.uniprot.org/uniprot/P95544 P95544]
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| − | ** [http://www.uniprot.org/uniprot/P78804 P78804]
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| − | </div>
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| − | {{#set: direction=reversible}}
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| − | {{#set: common-name=glutamate dehydrogenase}} | |
| − | {{#set: ec-number=ec-1.4.1.4}}
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| − | {{#set: nb gene associated=5}}
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| − | {{#set: nb pathway associated=4}}
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| − | {{#set: reconstruction category=annotation|orthology}}
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| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
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| − | {{#set: reconstruction comment=n.a}}
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| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
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