Difference between revisions of "DNA-LIGASE-NAD+-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6894 PWY-6894] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] *...")
(Created page with "Category:reaction == Reaction DNA-LIGASE-NAD+-RXN == * direction: ** left-to-right * common-name: ** dna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.5.1.6 ec-6.5...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6894 PWY-6894] ==
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== Reaction DNA-LIGASE-NAD+-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** left-to-right
 
* common-name:
 
* common-name:
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** thiamine diphosphate biosynthesis i (e. coli)
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** dna ligase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-12611]]
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** [http://enzyme.expasy.org/EC/6.5.1.6 ec-6.5.1.6]
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== Reaction(s) not found ==
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** [http://enzyme.expasy.org/EC/6.5.1.2 ec-6.5.1.2]
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* [http://metacyc.org/META/NEW-IMAGE?object=THI-P-KIN-RXN THI-P-KIN-RXN]
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== Reaction formula ==
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{{#set: taxonomic-range=tax-2}}
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* 1 [[3-Hydroxy-Terminated-DNAs]][c] '''+''' 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DNA-N]][c] '''+''' 1 [[NICOTINAMIDE_NUCLEOTIDE]][c] '''+''' 1 [[PROTON]][c]
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{{#set: common-name=thiamine diphosphate biosynthesis i (e. coli)}}
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== Gene(s) associated with this reaction  ==
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{{#set: nb reaction found=1}}
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* Gene: [[SJ15543]]
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{{#set: completion rate=0.5}}
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** Category: [[annotation]]
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{{#set: nb total reaction=2}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ19344]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) ==
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR115854
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00382 R00382]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P47496 P47496]
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** [http://www.uniprot.org/uniprot/Q9PHT0 Q9PHT0]
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** [http://www.uniprot.org/uniprot/Q9CIE4 Q9CIE4]
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** [http://www.uniprot.org/uniprot/P43813 P43813]
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** [http://www.uniprot.org/uniprot/O31498 O31498]
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** [http://www.uniprot.org/uniprot/O25336 O25336]
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** [http://www.uniprot.org/uniprot/O51502 O51502]
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** [http://www.uniprot.org/uniprot/P15042 P15042]
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** [http://www.uniprot.org/uniprot/P28719 P28719]
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** [http://www.uniprot.org/uniprot/P49422 P49422]
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** [http://www.uniprot.org/uniprot/P78021 P78021]
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** [http://www.uniprot.org/uniprot/P72588 P72588]
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** [http://www.uniprot.org/uniprot/Q49078 Q49078]
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{{#set: direction=left-to-right}}
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{{#set: common-name=dna ligase}}
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{{#set: ec-number=ec-6.5.1.2|ec-6.5.1.6}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction DNA-LIGASE-NAD+-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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