|
|
| (8 intermediate revisions by 4 users not shown) |
| Line 1: |
Line 1: |
| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE--TRNA-LIGASE-RXN CYSTEINE--TRNA-LIGASE-RXN] == | + | == Metabolite DNA-Ligase-L-lysine-guanylate == |
| − | * direction:
| |
| − | ** left-to-right
| |
| | * common-name: | | * common-name: |
| − | ** cysteine-trna ligase | + | ** a [dna ligase]-l-lysine-guanylate |
| − | * ec-number:
| + | == Reaction(s) known to consume the compound == |
| − | ** [http://enzyme.expasy.org/EC/6.1.1.16 ec-6.1.1.16]
| + | * [[RXN-17922]] |
| − | == Reaction formula ==
| + | == Reaction(s) known to produce the compound == |
| − | * 1 [[ATP]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[CYS-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-CYS-tRNAs]][c] '''+''' 1 [[PPI]][c]
| + | * [[RXN-17921]] |
| − | == Gene(s) associated with this reaction == | + | == Reaction(s) of unknown directionality == |
| − | * Gene: [[SJ19796]] | + | {{#set: common-name=a [dna ligase]-l-lysine-guanylate}} |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[SJ09098]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[SJ12227]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[SJ21439]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | == Pathway(s) == | |
| − | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | |
| − | ** '''21''' reactions found over '''21''' reactions in the full pathway
| |
| − | == Reconstruction information == | |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | == External links ==
| |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17774 17774]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03650 R03650]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/Q9PPB8 Q9PPB8]
| |
| − | ** [http://www.uniprot.org/uniprot/Q06752 Q06752]
| |
| − | ** [http://www.uniprot.org/uniprot/P43816 P43816]
| |
| − | ** [http://www.uniprot.org/uniprot/O29836 O29836]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9CEJ0 Q9CEJ0]
| |
| − | ** [http://www.uniprot.org/uniprot/O58370 O58370]
| |
| − | ** [http://www.uniprot.org/uniprot/O83129 O83129]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9ZE62 Q9ZE62]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9ZKW6 Q9ZKW6]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9WZH8 Q9WZH8]
| |
| − | ** [http://www.uniprot.org/uniprot/P41259 P41259]
| |
| − | ** [http://www.uniprot.org/uniprot/O51545 O51545]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9Z6X4 Q9Z6X4]
| |
| − | ** [http://www.uniprot.org/uniprot/O67163 O67163]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9JWJ3 Q9JWJ3]
| |
| − | ** [http://www.uniprot.org/uniprot/P47495 P47495]
| |
| − | ** [http://www.uniprot.org/uniprot/P75423 P75423]
| |
| − | ** [http://www.uniprot.org/uniprot/P74330 P74330]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9UWP2 Q9UWP2]
| |
| − | ** [http://www.uniprot.org/uniprot/P21888 P21888]
| |
| − | </div>
| |
| − | {{#set: direction=left-to-right}}
| |
| − | {{#set: common-name=cysteine-trna ligase}} | |
| − | {{#set: ec-number=ec-6.1.1.16}}
| |
| − | {{#set: nb gene associated=4}}
| |
| − | {{#set: nb pathway associated=1}}
| |
| − | {{#set: reconstruction category=orthology|annotation}}
| |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| |
| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
| |
