Difference between revisions of "DNA-N4-Methylcytosine"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVIN-SYN-RXN RIBOFLAVIN-SYN-RXN] == * direction: ** left-to-right * common-name: ** riboflavi...")
(Created page with "Category:metabolite == Metabolite MI-HEXAKISPHOSPHATE == * common-name: ** phytate * smiles: ** c1(op([o-])([o-])=o)(c(op([o-])(=o)[o-])c(op([o-])(=o)[o-])c(op(=o)([o-])[o...")
Line 1: Line 1:
[[Category:reaction]]
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[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVIN-SYN-RXN RIBOFLAVIN-SYN-RXN] ==
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== Metabolite MI-HEXAKISPHOSPHATE ==
* direction:
 
** left-to-right
 
 
* common-name:
 
* common-name:
** riboflavin synthase
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** phytate
* ec-number:
+
* smiles:
** [http://enzyme.expasy.org/EC/2.5.1.9 ec-2.5.1.9]
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** c1(op([o-])([o-])=o)(c(op([o-])(=o)[o-])c(op([o-])(=o)[o-])c(op(=o)([o-])[o-])c(op(=o)([o-])[o-])c(op([o-])([o-])=o)1)
== Reaction formula ==
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* inchi-key:
* 2 [[DIMETHYL-D-RIBITYL-LUMAZINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE]][c] '''+''' 1 [[RIBOFLAVIN]][c]
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** imqlkjbteoyosi-gpivlxjgsa-b
== Gene(s) associated with this reaction  ==
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* molecular-weight:
* Gene: [[SJ11166]]
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** 647.942
** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[2.7.1.152-RXN]]
** Category: [[orthology]]
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* [[RXN-10971]]
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN-10972]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN-10977]]
== Pathway(s) ==
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* [[RXN-10978]]
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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* [[RXN-7186]]
** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[RXN-7241]]
* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
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== Reaction(s) known to produce the compound ==
** '''5''' reactions found over '''10''' reactions in the full pathway
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* [[RXN-10964]]
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
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* [[RXN-10977]]
** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[RXN-10978]]
== Reconstruction information  ==
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* [[RXN-7163]]
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-7186]]
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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== Reaction(s) of unknown directionality ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: common-name=phytate}}
== External links  ==
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{{#set: inchi-key=inchikey=imqlkjbteoyosi-gpivlxjgsa-b}}
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: molecular-weight=647.942}}
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20773 20773]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00066 R00066]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P11998 P11998]
 
** [http://www.uniprot.org/uniprot/P16440 P16440]
 
** [http://www.uniprot.org/uniprot/Q9JUA6 Q9JUA6]
 
** [http://www.uniprot.org/uniprot/O24854 O24854]
 
** [http://www.uniprot.org/uniprot/O26237 O26237]
 
** [http://www.uniprot.org/uniprot/P66037 P66037]
 
** [http://www.uniprot.org/uniprot/Q9CGU8 Q9CGU8]
 
** [http://www.uniprot.org/uniprot/Q9YDC5 Q9YDC5]
 
** [http://www.uniprot.org/uniprot/Q9PN77 Q9PN77]
 
** [http://www.uniprot.org/uniprot/Q9CGU6 Q9CGU6]
 
** [http://www.uniprot.org/uniprot/P45273 P45273]
 
** [http://www.uniprot.org/uniprot/Q9PIB9 Q9PIB9]
 
** [http://www.uniprot.org/uniprot/O66529 O66529]
 
** [http://www.uniprot.org/uniprot/Q58584 Q58584]
 
** [http://www.uniprot.org/uniprot/O28856 O28856]
 
** [http://www.uniprot.org/uniprot/Q01994 Q01994]
 
** [http://www.uniprot.org/uniprot/P61714 P61714]
 
** [http://www.uniprot.org/uniprot/P0AFU8 P0AFU8]
 
** [http://www.uniprot.org/uniprot/P38145 P38145]
 
** [http://www.uniprot.org/uniprot/Q55532 Q55532]
 
** [http://www.uniprot.org/uniprot/P73527 P73527]
 
** [http://www.uniprot.org/uniprot/Q44680 Q44680]
 
** [http://www.uniprot.org/uniprot/Q44681 Q44681]
 
** [http://www.uniprot.org/uniprot/P50854 P50854]
 
** [http://www.uniprot.org/uniprot/P50856 P50856]
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=riboflavin synthase}}
 
{{#set: ec-number=ec-2.5.1.9}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
 

Revision as of 20:35, 18 December 2020

Metabolite MI-HEXAKISPHOSPHATE

  • common-name:
    • phytate
  • smiles:
    • c1(op([o-])([o-])=o)(c(op([o-])(=o)[o-])c(op([o-])(=o)[o-])c(op(=o)([o-])[o-])c(op(=o)([o-])[o-])c(op([o-])([o-])=o)1)
  • inchi-key:
    • imqlkjbteoyosi-gpivlxjgsa-b
  • molecular-weight:
    • 647.942

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality