Difference between revisions of "DNA-with-mismatch"

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(Created page with "Category:gene == Gene SJ21798 == * transcription-direction: ** negative * right-end-position: ** 41506 * left-end-position: ** 24465 * centisome-position: ** 4.1395726...")
(Created page with "Category:gene == Gene SJ11565 == * transcription-direction: ** positive * right-end-position: ** 296026 * left-end-position: ** 281776 * centisome-position: ** 76.050026...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21798 ==
+
== Gene SJ11565 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 41506
+
** 296026
 
* left-end-position:
 
* left-end-position:
−
** 24465
+
** 281776
 
* centisome-position:
 
* centisome-position:
−
** 4.1395726    
+
** 76.050026    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PPPGO]]
+
* [[3.1.3.56-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PROTOPORGENOXI-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17517]]
+
* [[PHOSPHATIDYLINOSITOL-BISPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10036]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8730]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7159]]
+
* [[PWY-6363]]
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY0-1415]]
+
* [[PWY-6368]]
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
* [[CHLOROPHYLL-SYN]]
 
 
** '''6''' reactions found over '''9''' reactions in the full pathway
 
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[HEME-BIOSYNTHESIS-II]]
+
* [[PWY-6362]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7766]]
+
* [[PWY-6364]]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=41506}}
+
{{#set: right-end-position=296026}}
−
{{#set: left-end-position=24465}}
+
{{#set: left-end-position=281776}}
−
{{#set: centisome-position=4.1395726   }}
+
{{#set: centisome-position=76.050026   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=4}}

Revision as of 09:28, 27 August 2019

Gene SJ11565

  • transcription-direction:
    • positive
  • right-end-position:
    • 296026
  • left-end-position:
    • 281776
  • centisome-position:
    • 76.050026

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6363
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6368
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-6362
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6364
    • 2 reactions found over 3 reactions in the full pathway




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