Difference between revisions of "DTDP-DEOH-DEOXY-MANNOSE"

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(Created page with "Category:gene == Gene SJ21817 == * transcription-direction: ** positive * right-end-position: ** 58022 * left-end-position: ** 53154 * centisome-position: ** 28.611723...")
(Created page with "Category:metabolite == Metabolite DTDP-DEOH-DEOXY-MANNOSE == * common-name: ** dtdp-4-dehydro-β-l-rhamnose * smiles: ** cc1(=cn(c(=o)nc(=o)1)c3(cc(o)c(cop(=o)([o-])op...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ21817 ==
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== Metabolite DTDP-DEOH-DEOXY-MANNOSE ==
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* transcription-direction:
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* common-name:
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** positive
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** dtdp-4-dehydro-β-l-rhamnose
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* right-end-position:
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* smiles:
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** 58022
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** cc1(=cn(c(=o)nc(=o)1)c3(cc(o)c(cop(=o)([o-])op(=o)([o-])oc2(oc(c)c(=o)c(o)c(o)2))o3))
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* left-end-position:
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* inchi-key:
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** 53154
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** psxwnitxwwecny-lpvgzgshsa-l
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* centisome-position:
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* molecular-weight:
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** 28.611723   
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** 544.302
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[DTDPDEHYRHAMREDUCT-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[DTDPDEHYDRHAMEPIM-RXN]]
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* [[KETOACYLCOATHIOL-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=dtdp-4-dehydro-&beta;-l-rhamnose}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=psxwnitxwwecny-lpvgzgshsa-l}}
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* [[RXN-10699]]
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{{#set: molecular-weight=544.302}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-10700]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-10701]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-11246]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12565]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12710]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-13617]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-14268]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-14274]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-14277]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-14394]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-14774]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-14788]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-14793]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-14799]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-14803]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-16137]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-17116]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-17778]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-17782]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-17787]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-17791]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-17795]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-17799]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[PWY-7288]]
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-5136]]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[FAO-PWY]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY66-391]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-735]]
 
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** '''16''' reactions found over '''19''' reactions in the full pathway
 
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* [[PWY-6435]]
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-6863]]
 
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** '''9''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-6945]]
 
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** '''5''' reactions found over '''17''' reactions in the full pathway
 
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* [[PWY-6946]]
 
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** '''6''' reactions found over '''22''' reactions in the full pathway
 
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* [[PWY-6948]]
 
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** '''2''' reactions found over '''18''' reactions in the full pathway
 
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* [[PWY-7094]]
 
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** '''5''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7654]]
 
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** '''5''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-7337]]
 
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** '''6''' reactions found over '''12''' reactions in the full pathway
 
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* [[PWY-7338]]
 
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** '''6''' reactions found over '''12''' reactions in the full pathway
 
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* [[PWY-7339]]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7340]]
 
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** '''5''' reactions found over '''10''' reactions in the full pathway
 
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* [[PWY-7606]]
 
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** '''8''' reactions found over '''14''' reactions in the full pathway
 
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* [[PWY-7726]]
 
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** '''8''' reactions found over '''13''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=58022}}
 
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{{#set: left-end-position=53154}}
 
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{{#set: centisome-position=28.611723    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=25}}
 
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{{#set: nb pathway associated=18}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite DTDP-DEOH-DEOXY-MANNOSE

  • common-name:
    • dtdp-4-dehydro-β-l-rhamnose
  • smiles:
    • cc1(=cn(c(=o)nc(=o)1)c3(cc(o)c(cop(=o)([o-])op(=o)([o-])oc2(oc(c)c(=o)c(o)c(o)2))o3))
  • inchi-key:
    • psxwnitxwwecny-lpvgzgshsa-l
  • molecular-weight:
    • 544.302

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=DTDP-DEOH-DEOXY-MANNOSE&oldid=136731"