Difference between revisions of "DTDP-DEOH-DEOXY-MANNOSE"

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(Created page with "Category:gene == Gene SJ02212 == * transcription-direction: ** negative * right-end-position: ** 36226 * left-end-position: ** 22449 * centisome-position: ** 16.035688...")
(Created page with "Category:metabolite == Metabolite DTDP-DEOH-DEOXY-MANNOSE == * common-name: ** dtdp-4-dehydro-β-l-rhamnose * smiles: ** cc1(=cn(c(=o)nc(=o)1)c3(cc(o)c(cop(=o)([o-])op...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ02212 ==
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== Metabolite DTDP-DEOH-DEOXY-MANNOSE ==
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* transcription-direction:
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* common-name:
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** negative
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** dtdp-4-dehydro-β-l-rhamnose
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* right-end-position:
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* smiles:
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** 36226
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** cc1(=cn(c(=o)nc(=o)1)c3(cc(o)c(cop(=o)([o-])op(=o)([o-])oc2(oc(c)c(=o)c(o)c(o)2))o3))
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* left-end-position:
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* inchi-key:
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** 22449
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** psxwnitxwwecny-lpvgzgshsa-l
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* centisome-position:
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* molecular-weight:
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** 16.035688   
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** 544.302
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[DTDPDEHYRHAMREDUCT-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[CITSYN-RXN]]
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* [[DTDPDEHYDRHAMEPIM-RXN]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=dtdp-4-dehydro-β-l-rhamnose}}
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* [[CSm]]
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{{#set: inchi-key=inchikey=psxwnitxwwecny-lpvgzgshsa-l}}
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** Category: [[orthology]]
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{{#set: molecular-weight=544.302}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[P105-PWY]]
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
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* [[TCA]]
 
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** '''9''' reactions found over '''10''' reactions in the full pathway
 
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* [[REDCITCYC]]
 
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** '''5''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY66-398]]
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-7254]]
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6969]]
 
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** '''10''' reactions found over '''12''' reactions in the full pathway
 
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* [[PWY-5913]]
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
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* [[FERMENTATION-PWY]]
 
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** '''11''' reactions found over '''16''' reactions in the full pathway
 
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* [[PWY-7124]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-6728]]
 
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** '''11''' reactions found over '''19''' reactions in the full pathway
 
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* [[GLYOXYLATE-BYPASS]]
 
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** '''6''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-6549]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-5750]]
 
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** '''3''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-5690]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=36226}}
 
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{{#set: left-end-position=22449}}
 
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{{#set: centisome-position=16.035688    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=2}}
 
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{{#set: nb pathway associated=14}}
 

Latest revision as of 11:11, 18 March 2021

Metabolite DTDP-DEOH-DEOXY-MANNOSE

  • common-name:
    • dtdp-4-dehydro-β-l-rhamnose
  • smiles:
    • cc1(=cn(c(=o)nc(=o)1)c3(cc(o)c(cop(=o)([o-])op(=o)([o-])oc2(oc(c)c(=o)c(o)c(o)2))o3))
  • inchi-key:
    • psxwnitxwwecny-lpvgzgshsa-l
  • molecular-weight:
    • 544.302

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=DTDP-DEOH-DEOXY-MANNOSE&oldid=136731"