Difference between revisions of "DTDPDEHYDRHAMEPIM-RXN"
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(Created page with "Category:reaction == Reaction RXN-5682 == * direction: ** left-to-right * common-name: ** arogenate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.78 ec-...") |
(Created page with "Category:reaction == Reaction DTDPDEHYDRHAMEPIM-RXN == * direction: ** left-to-right * common-name: ** dtdp-4-dehydrorhamnose 3,5-epimerase * ec-number: ** [http://enzyme....") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction DTDPDEHYDRHAMEPIM-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** dtdp-4-dehydrorhamnose 3,5-epimerase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/1.3. | + | ** [http://enzyme.expasy.org/EC/5.1.3.13 ec-5.1.3.13] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[DTDP-DEOH-DEOXY-GLUCOSE]][c] '''=>''' 1 [[DTDP-DEOH-DEOXY-MANNOSE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ22556]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[DTDPRHAMSYN-PWY]], dTDP-β-L-rhamnose biosynthesis: |
− | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
+ | * [[PWY-7301]], dTDP-4-O-demethyl-β-L-noviose biosynthesis: | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7814]], dTDP-L-daunosamine biosynthesis: | ||
+ | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * METANETX-RXN : MNXR104759 | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16969 16969] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R06514 R06514] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JWX1 Q9JWX1] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JWW7 Q9JWW7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UZG9 Q9UZG9] | ||
+ | ** [http://www.uniprot.org/uniprot/P37745 P37745] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M0V5 Q7M0V5] | ||
+ | ** [http://www.uniprot.org/uniprot/P37763 P37763] | ||
+ | ** [http://www.uniprot.org/uniprot/Q46770 Q46770] | ||
+ | ** [http://www.uniprot.org/uniprot/P29783 P29783] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=dtdp-4-dehydrorhamnose 3,5-epimerase}} |
− | {{#set: ec-number=ec-1.3. | + | {{#set: ec-number=ec-5.1.3.13}} |
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} |
Latest revision as of 11:19, 18 March 2021
Contents
Reaction DTDPDEHYDRHAMEPIM-RXN
- direction:
- left-to-right
- common-name:
- dtdp-4-dehydrorhamnose 3,5-epimerase
- ec-number:
Reaction formula
- 1 DTDP-DEOH-DEOXY-GLUCOSE[c] => 1 DTDP-DEOH-DEOXY-MANNOSE[c]
Gene(s) associated with this reaction
- Gene: SJ22556
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- DTDPRHAMSYN-PWY, dTDP-β-L-rhamnose biosynthesis:
- 3 reactions found over 4 reactions in the full pathway
- PWY-7301, dTDP-4-O-demethyl-β-L-noviose biosynthesis:
- 2 reactions found over 5 reactions in the full pathway
- PWY-7814, dTDP-L-daunosamine biosynthesis:
- 2 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR104759
- RHEA:
- LIGAND-RXN:
- UNIPROT: