Difference between revisions of "DUDP"

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(Created page with "Category:gene == Gene SJ05001 == * transcription-direction: ** negative * right-end-position: ** 124254 * left-end-position: ** 116058 * centisome-position: ** 12.018839...")
(Created page with "Category:metabolite == Metabolite DUDP == * common-name: ** dudp * smiles: ** c(op(=o)([o-])op(=o)([o-])[o-])c1(oc(cc(o)1)n2(c=cc(=o)nc(=o)2)) * inchi-key: ** qhwztvccbmii...")
 
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ05001 ==
+
== Metabolite DUDP ==
* transcription-direction:
+
* common-name:
** negative
+
** dudp
* right-end-position:
+
* smiles:
** 124254
+
** c(op(=o)([o-])op(=o)([o-])[o-])c1(oc(cc(o)1)n2(c=cc(=o)nc(=o)2))
* left-end-position:
+
* inchi-key:
** 116058
+
** qhwztvccbmiike-shyzeuofsa-k
* centisome-position:
+
* molecular-weight:
** 12.018839   
+
** 385.14
== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
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* [[ATDUD]]
== Reaction(s) associated ==
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* [[ATDUDm]]
* [[GTP-CYCLOHYDRO-II-RXN]]
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* [[DUDPKIN-RXN]]
** Category: [[annotation]]
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* [[RXN-14220]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
== Reaction(s) known to produce the compound ==
** Category: [[orthology]]
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* [[DUDT]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[DUTCP]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[DUTUP]]
== Pathway(s) associated ==
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* [[RXN-14219]]
* [[RIBOSYN2-PWY]]
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* [[RXN0-722]]
** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[UDPREDUCT-RXN]]
* [[PWY-7539]]
+
== Reaction(s) of unknown directionality ==
** '''4''' reactions found over '''5''' reactions in the full pathway
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{{#set: common-name=dudp}}
* [[PWY-6168]]
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{{#set: inchi-key=inchikey=qhwztvccbmiike-shyzeuofsa-k}}
** '''7''' reactions found over '''9''' reactions in the full pathway
+
{{#set: molecular-weight=385.14}}
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=124254}}
 
{{#set: left-end-position=116058}}
 
{{#set: centisome-position=12.018839    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=1}}
 
{{#set: nb pathway associated=3}}
 

Latest revision as of 11:13, 18 March 2021

Metabolite DUDP

  • common-name:
    • dudp
  • smiles:
    • c(op(=o)([o-])op(=o)([o-])[o-])c1(oc(cc(o)1)n2(c=cc(=o)nc(=o)2))
  • inchi-key:
    • qhwztvccbmiike-shyzeuofsa-k
  • molecular-weight:
    • 385.14

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality