Difference between revisions of "DUDPKIN-RXN"
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(Created page with "Category:reaction == Reaction RXN-16154 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.330 ec-1.1.1.330] == Reaction formula == * 1 ...") |
(Created page with "Category:reaction == Reaction 3.4.24.64-RXN == * direction: ** left-to-right * common-name: ** mitochondrial-processing peptidase * ec-number: ** [http://enzyme.expasy.org...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction 3.4.24.64-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
+ | * common-name: | ||
+ | ** mitochondrial-processing peptidase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.4.24.64 ec-3.4.24.64] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[Mitochondrial-Preproteins]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MPP-processed-mitochonrial-proteins]][c] '''+''' 1 [[Peptides-holder]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ13715]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ09586]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ08789]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ13651]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | |||
− | |||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P11913 P11913] | ||
+ | ** [http://www.uniprot.org/uniprot/P20069 P20069] | ||
+ | ** [http://www.uniprot.org/uniprot/P23955 P23955] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9T2S9 Q9T2S9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9T2S8 Q9T2S8] | ||
+ | ** [http://www.uniprot.org/uniprot/P10507 P10507] | ||
+ | ** [http://www.uniprot.org/uniprot/P29677 P29677] | ||
+ | ** [http://www.uniprot.org/uniprot/Q03346 Q03346] | ||
+ | ** [http://www.uniprot.org/uniprot/Q41440 Q41440] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UG64 Q9UG64] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9P7X1 Q9P7X1] | ||
+ | ** [http://www.uniprot.org/uniprot/P11914 P11914] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: ec-number=ec- | + | {{#set: common-name=mitochondrial-processing peptidase}} |
− | {{#set: nb gene associated= | + | {{#set: ec-number=ec-3.4.24.64}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=4}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: nb pathway associated=0}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction category=annotation|orthology}} |
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 13:20, 14 January 2021
Contents
Reaction 3.4.24.64-RXN
- direction:
- left-to-right
- common-name:
- mitochondrial-processing peptidase
- ec-number:
Reaction formula
- 1 Mitochondrial-Preproteins[c] + 1 WATER[c] => 1 MPP-processed-mitochonrial-proteins[c] + 1 Peptides-holder[c]
Gene(s) associated with this reaction
- Gene: SJ13715
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ09586
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ08789
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ13651
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links