Difference between revisions of "DUDT"

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(Created page with "Category:reaction == Reaction 3.2.2.23-RXN == * direction: ** left-to-right * common-name: ** oxidized purine nucleobase lesion dna n-glycosylase ** formamidopyrimidine dn...")
(Created page with "Category:reaction == Reaction DUDT == * direction: ** left-to-right * common-name: ** 2'-deoxyuridine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase == Reaction for...")
 
(5 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.2.2.23-RXN ==
+
== Reaction DUDT ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** oxidized purine nucleobase lesion dna n-glycosylase
+
** 2'-deoxyuridine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase
−
** formamidopyrimidine dna glycosylase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.2.2.23 ec-3.2.2.23]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DNA-containing-diamino-hydro-formamidops]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-16491]][c] '''+''' 1 [[DNA-containing-aPurinic-Sites]][c]
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* 1.0 [[Red-Thioredoxin]][c] '''+''' 1.0 [[UDP]][c] '''=>''' 1.0 [[DUDP]][c] '''+''' 1.0 [[Ox-Thioredoxin]][c] '''+''' 1.0 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18415]]
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* Gene: [[SJ05642]]
−
** Category: [[annotation]]
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** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ12532]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ12275]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P44948 P44948]
 
−
** [http://www.uniprot.org/uniprot/P57014 P57014]
 
−
** [http://www.uniprot.org/uniprot/P05523 P05523]
 
−
** [http://www.uniprot.org/uniprot/P19210 P19210]
 
−
** [http://www.uniprot.org/uniprot/P74290 P74290]
 
−
** [http://www.uniprot.org/uniprot/O69470 O69470]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=formamidopyrimidine dna glycosylase|oxidized purine nucleobase lesion dna n-glycosylase}}
+
{{#set: common-name=2'-deoxyuridine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase}}
−
{{#set: ec-number=ec-3.2.2.23}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:19, 18 March 2021

Reaction DUDT

  • direction:
    • left-to-right
  • common-name:
    • 2'-deoxyuridine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=DUDT&oldid=140261"