Difference between revisions of "DUTCP"

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(Created page with "Category:reaction == Reaction RXN-5467 == * direction: ** left-to-right * common-name: ** (mannosyl)6-(n-acetylglucosaminyl)2-diphosphodolichol:dolichyl β-d-mannosyl...")
(Created page with "Category:reaction == Reaction 3.2.1.24-RXN == * direction: ** left-to-right * common-name: ** alpha-mannosidase ** alpha-mannosidase 2 * ec-number: ** [http://enzyme.expas...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-5467 ==
+
== Reaction 3.2.1.24-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** (mannosyl)6-(n-acetylglucosaminyl)2-diphosphodolichol:dolichyl β-d-mannosyl phosphate mannosyl transferase
+
** alpha-mannosidase
 +
** alpha-mannosidase 2
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.259 ec-2.4.1.259]
+
** [http://enzyme.expasy.org/EC/3.2.1.24 ec-3.2.1.24]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-171]][c] '''+''' 1 [[CPD-5165]][c] '''=>''' 1 [[CPD-5166]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Alpha-D-Mannosides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13559]][c] '''+''' 1 [[Non-Glycosylated-sugar-Acceptors]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19084]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ11475]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ11915]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ11476]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ14176]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05107]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05034]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ08010]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic):
 
−
** '''16''' reactions found over '''19''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* UNIPROT:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06259 R06259]
+
** [http://www.uniprot.org/uniprot/P21139 P21139]
−
* RHEA:
+
** [http://www.uniprot.org/uniprot/P34098 P34098]
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29534 29534]
+
** [http://www.uniprot.org/uniprot/P39098 P39098]
 +
** [http://www.uniprot.org/uniprot/P22855 P22855]
 +
** [http://www.uniprot.org/uniprot/Q43249 Q43249]
 +
** [http://www.uniprot.org/uniprot/O13344 O13344]
 +
** [http://www.uniprot.org/uniprot/O46432 O46432]
 +
** [http://www.uniprot.org/uniprot/O09159 O09159]
 +
** [http://www.uniprot.org/uniprot/Q9NTJ4 Q9NTJ4]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=(mannosyl)6-(n-acetylglucosaminyl)2-diphosphodolichol:dolichyl &beta;-d-mannosyl phosphate mannosyl transferase}}
+
{{#set: common-name=alpha-mannosidase|alpha-mannosidase 2}}
−
{{#set: ec-number=ec-2.4.1.259}}
+
{{#set: ec-number=ec-3.2.1.24}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:03, 5 January 2021

Reaction 3.2.1.24-RXN

  • direction:
    • left-to-right
  • common-name:
    • alpha-mannosidase
    • alpha-mannosidase 2
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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