Difference between revisions of "DXPREDISOM-RXN"

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(Created page with "Category:reaction == Reaction RXN-10704 == * direction: ** left-to-right * common-name: ** opc6-trans-2-enoyl-coa hydratase ** enoyl-coa hydratase * ec-number: ** [http://...")
(Created page with "Category:reaction == Reaction RXN4FS-12 == * direction: ** left-to-right * common-name: ** gdp-galactose:mannose-1-phosphate guanylyltransferase == Reaction formula == * 1...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-10704 ==
+
== Reaction RXN4FS-12 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** opc6-trans-2-enoyl-coa hydratase
+
** gdp-galactose:mannose-1-phosphate guanylyltransferase
** enoyl-coa hydratase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-11522]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-11523]][c]
+
* 1 [[GDP-L-GALACTOSE]][c] '''+''' 1 [[MANNOSE-1P]][c] '''=>''' 1 [[CPDQT-4]][c] '''+''' 1 [[GDP-MANNOSE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ18078]]
* Gene: [[SJ03584]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
* Gene: [[SJ14591]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ07211]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ21390]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ10275]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ03913]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-735]], jasmonic acid biosynthesis:
+
* [[PWY4FS-12]], VTC2 cycle:
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=enoyl-coa hydratase|opc6-trans-2-enoyl-coa hydratase}}
+
{{#set: common-name=gdp-galactose:mannose-1-phosphate guanylyltransferase}}
{{#set: ec-number=ec-4.2.1.17}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=6}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:02, 5 January 2021

Reaction RXN4FS-12

  • direction:
    • left-to-right
  • common-name:
    • gdp-galactose:mannose-1-phosphate guanylyltransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY4FS-12, VTC2 cycle:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links