Difference between revisions of "Dicarboxylate"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOGLUCMUT-RXN PHOSPHOGLUCMUT-RXN] == * direction: ** reversible * common-name: ** phosphogluco...")
 
(Created page with "Category:metabolite == Metabolite dicarboxylate == * common-name: ** a dicarboxylate == Reaction(s) known to consume the compound == * OMEGA-AMIDASE-RXN == Reaction(s)...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOGLUCMUT-RXN PHOSPHOGLUCMUT-RXN] ==
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== Metabolite dicarboxylate ==
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* direction:
 
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** reversible
 
 
* common-name:
 
* common-name:
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** phosphoglucomutase
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** a dicarboxylate
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* ec-number:
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== Reaction(s) known to consume the compound ==
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** [http://enzyme.expasy.org/EC/5.4.2.2 ec-5.4.2.2]
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* [[OMEGA-AMIDASE-RXN]]
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== Reaction formula ==
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== Reaction(s) known to produce the compound ==
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* 1 [[GLC-1-P]][c] '''<=>''' 1 [[D-glucopyranose-6-phosphate]][c]
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* [[OMEGA-AMIDASE-RXN]]
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== Gene(s) associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
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* Gene: [[SJ05004]]
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{{#set: common-name=a dicarboxylate}}
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ18341]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ12510]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ02279]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ12467]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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== Pathway(s) ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[PWY-6737]], starch degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6737 PWY-6737]
 
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** '''2''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
 
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** '''5''' reactions found over '''8''' reactions in the full pathway
 
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* [[GLYCOGENSYNTH-PWY]], glycogen biosynthesis I (from ADP-D-Glucose): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOGENSYNTH-PWY GLYCOGENSYNTH-PWY]
 
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
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* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY]
 
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-7900]], glycogen biosynthesis III (from &alpha;-maltose 1-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7900 PWY-7900]
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-6731]], starch degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6731 PWY-6731]
 
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** '''2''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-5941]], glycogen degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5941 PWY-5941]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
 
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** '''6''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-622]], starch biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-622 PWY-622]
 
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** '''2''' reactions found over '''10''' reactions in the full pathway
 
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* [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-2723]], trehalose degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2723 PWY-2723]
 
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** '''2''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-3801]], sucrose degradation II (sucrose synthase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801]
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-7343]], UDP-&alpha;-D-glucose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7343 PWY-7343]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-5940]], streptomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5940 PWY-5940]
 
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** '''2''' reactions found over '''18''' reactions in the full pathway
 
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* [[PWY-7902]], glucosylglycerol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7902 PWY-7902]
 
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** '''2''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5384 PWY-5384]
 
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-5661]], GDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661]
 
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** '''2''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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</div>
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23539 23539]
 
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* PIR:
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41801 A41801]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A53614 A53614]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B53614 B53614]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E70650 E70650]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G64803 G64803]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G81947 G81947]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I39487 I39487]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I41215 I41215]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRB PMRB]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRBI PMRBI]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRT PMRT]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S10741 S10741]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S39397 S39397]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41199 S41199]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41200 S41200]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S76847 S76847]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78440 S78440]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04326 T04326]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04327 T04327]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T12574 T12574]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52656 T52656]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P36871 P36871]
 
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** [http://www.uniprot.org/uniprot/P40390 P40390]
 
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** [http://www.uniprot.org/uniprot/P40391 P40391]
 
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** [http://www.uniprot.org/uniprot/P95090 P95090]
 
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** [http://www.uniprot.org/uniprot/P36938 P36938]
 
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** [http://www.uniprot.org/uniprot/P57002 P57002]
 
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** [http://www.uniprot.org/uniprot/P38569 P38569]
 
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** [http://www.uniprot.org/uniprot/P31120 P31120]
 
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** [http://www.uniprot.org/uniprot/P00949 P00949]
 
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** [http://www.uniprot.org/uniprot/P38652 P38652]
 
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** [http://www.uniprot.org/uniprot/Q7M2K5 Q7M2K5]
 
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** [http://www.uniprot.org/uniprot/Q16106 Q16106]
 
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** [http://www.uniprot.org/uniprot/P33401 P33401]
 
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** [http://www.uniprot.org/uniprot/P37012 P37012]
 
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** [http://www.uniprot.org/uniprot/P74643 P74643]
 
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** [http://www.uniprot.org/uniprot/Q51847 Q51847]
 
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** [http://www.uniprot.org/uniprot/P93804 P93804]
 
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** [http://www.uniprot.org/uniprot/P93805 P93805]
 
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** [http://www.uniprot.org/uniprot/P93262 P93262]
 
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** [http://www.uniprot.org/uniprot/Q9SCY0 Q9SCY0]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00959 R00959]
 
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</div>
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=phosphoglucomutase}}
 
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{{#set: ec-number=ec-5.4.2.2}}
 
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{{#set: nb gene associated=5}}
 
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{{#set: nb pathway associated=18}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pathwaytools|pantograph}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:18, 18 March 2021

Metabolite dicarboxylate

  • common-name:
    • a dicarboxylate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=Dicarboxylate&oldid=139860"