Difference between revisions of "Donor-H2"

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(Created page with "Category:gene == Gene SJ02379 == * transcription-direction: ** positive * right-end-position: ** 44379 * left-end-position: ** 29269 * centisome-position: ** 21.466394...")
(Created page with "Category:gene == Gene SJ18020 == * transcription-direction: ** positive * right-end-position: ** 185208 * left-end-position: ** 163861 * centisome-position: ** 63.923557...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02379 ==
+
== Gene SJ18020 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 44379
+
** 185208
 
* left-end-position:
 
* left-end-position:
−
** 29269
+
** 163861
 
* centisome-position:
 
* centisome-position:
−
** 21.466394    
+
** 63.923557    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
+
* [[PHOSGLYPHOS-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY66-399]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[P124-PWY]]
 +
** '''12''' reactions found over '''15''' reactions in the full pathway
 +
* [[CALVIN-PWY]]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[P185-PWY]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[P122-PWY]]
 +
** '''16''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5484]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-1042]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[GLYCOLYSIS]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[ANAGLYCOLYSIS-PWY]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7003]]
 +
** '''8''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6901]]
 +
** '''10''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6886]]
 +
** '''8''' reactions found over '''5''' reactions in the full pathway
 +
* [[SUCSYN-PWY]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=44379}}
+
{{#set: right-end-position=185208}}
−
{{#set: left-end-position=29269}}
+
{{#set: left-end-position=163861}}
−
{{#set: centisome-position=21.466394   }}
+
{{#set: centisome-position=63.923557   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=1}}
 
{{#set: nb reaction associated=1}}
 +
{{#set: nb pathway associated=14}}

Revision as of 09:28, 27 August 2019

Gene SJ18020

  • transcription-direction:
    • positive
  • right-end-position:
    • 185208
  • left-end-position:
    • 163861
  • centisome-position:
    • 63.923557

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-7003
    • 8 reactions found over 6 reactions in the full pathway
  • PWY-6901
    • 10 reactions found over 8 reactions in the full pathway
  • PWY-6886
    • 8 reactions found over 5 reactions in the full pathway
  • SUCSYN-PWY
    • 6 reactions found over 7 reactions in the full pathway




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