Difference between revisions of "E-PHENYLITACONYL-COA"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LIPOXYGENASE-RXN LIPOXYGENASE-RXN] == * direction: ** left-to-right * common-name: ** linoleate 13s...")
(Created page with "Category:metabolite == Metabolite E-PHENYLITACONYL-COA == * common-name: ** (e)-2-benzylidenesuccinyl-coa * smiles: ** cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)c(cc(=o)[o-])=cc1(c=...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LIPOXYGENASE-RXN LIPOXYGENASE-RXN] ==
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== Metabolite E-PHENYLITACONYL-COA ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** linoleate 13s-lipoxygenase
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** (e)-2-benzylidenesuccinyl-coa
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/1.13.11.12 ec-1.13.11.12]
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** cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)c(cc(=o)[o-])=cc1(c=cc=cc=1))cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-]
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== Reaction formula ==
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* inchi-key:
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* 1 [[LINOLEIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[13-HYDROPEROXYOCTADECA-911-DIENOATE]][c]
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** cizckpngzpendv-umuuvtgisa-i
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ16632]]
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** 950.677
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[RXN-902]]
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* Gene: [[SJ03316]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: common-name=(e)-2-benzylidenesuccinyl-coa}}
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* Gene: [[SJ08291]]
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{{#set: inchi-key=inchikey=cizckpngzpendv-umuuvtgisa-i}}
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** Category: [[annotation]]
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{{#set: molecular-weight=950.677}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ16633]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ12567]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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== Pathway(s) ==
 
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* [[PWY-5410]], traumatin and (Z)-3-hexen-1-yl acetate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410]
 
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** '''2''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-5409]], divinyl ether biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5409 PWY-5409]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22781 22781]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03626 R03626]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P09439 P09439]
 
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** [http://www.uniprot.org/uniprot/P08170 P08170]
 
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** [http://www.uniprot.org/uniprot/Q06327 Q06327]
 
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** [http://www.uniprot.org/uniprot/P38418 P38418]
 
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** [http://www.uniprot.org/uniprot/Q9S8X5 Q9S8X5]
 
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** [http://www.uniprot.org/uniprot/P09918 P09918]
 
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** [http://www.uniprot.org/uniprot/P14856 P14856]
 
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** [http://www.uniprot.org/uniprot/P24095 P24095]
 
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** [http://www.uniprot.org/uniprot/Q41244 Q41244]
 
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** [http://www.uniprot.org/uniprot/Q41245 Q41245]
 
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** [http://www.uniprot.org/uniprot/Q9S9D8 Q9S9D8]
 
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** [http://www.uniprot.org/uniprot/P27481 P27481]
 
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** [http://www.uniprot.org/uniprot/P27480 P27480]
 
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** [http://www.uniprot.org/uniprot/P29250 P29250]
 
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** [http://www.uniprot.org/uniprot/P37831 P37831]
 
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** [http://www.uniprot.org/uniprot/Q43817 Q43817]
 
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** [http://www.uniprot.org/uniprot/Q43800 Q43800]
 
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** [http://www.uniprot.org/uniprot/Q42710 Q42710]
 
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** [http://www.uniprot.org/uniprot/P29114 P29114]
 
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** [http://www.uniprot.org/uniprot/Q42846 Q42846]
 
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** [http://www.uniprot.org/uniprot/Q42847 Q42847]
 
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** [http://www.uniprot.org/uniprot/P93184 P93184]
 
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** [http://www.uniprot.org/uniprot/P93190 P93190]
 
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** [http://www.uniprot.org/uniprot/Q41520 Q41520]
 
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** [http://www.uniprot.org/uniprot/P38416 P38416]
 
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** [http://www.uniprot.org/uniprot/Q42873 Q42873]
 
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** [http://www.uniprot.org/uniprot/Q43438 Q43438]
 
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** [http://www.uniprot.org/uniprot/Q43440 Q43440]
 
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** [http://www.uniprot.org/uniprot/O24295 O24295]
 
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** [http://www.uniprot.org/uniprot/Q42780 Q42780]
 
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** [http://www.uniprot.org/uniprot/O24470 O24470]
 
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** [http://www.uniprot.org/uniprot/Q43501 Q43501]
 
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** [http://www.uniprot.org/uniprot/Q43446 Q43446]
 
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** [http://www.uniprot.org/uniprot/O49878 O49878]
 
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** [http://www.uniprot.org/uniprot/O49880 O49880]
 
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** [http://www.uniprot.org/uniprot/O24370 O24370]
 
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** [http://www.uniprot.org/uniprot/O24371 O24371]
 
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** [http://www.uniprot.org/uniprot/Q41430 Q41430]
 
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** [http://www.uniprot.org/uniprot/Q96573 Q96573]
 
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** [http://www.uniprot.org/uniprot/Q96574 Q96574]
 
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** [http://www.uniprot.org/uniprot/P38417 P38417]
 
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** [http://www.uniprot.org/uniprot/Q39874 Q39874]
 
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** [http://www.uniprot.org/uniprot/Q39875 Q39875]
 
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** [http://www.uniprot.org/uniprot/Q43191 Q43191]
 
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** [http://www.uniprot.org/uniprot/Q39611 Q39611]
 
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** [http://www.uniprot.org/uniprot/Q42705 Q42705]
 
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** [http://www.uniprot.org/uniprot/P93698 P93698]
 
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** [http://www.uniprot.org/uniprot/O24320 O24320]
 
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** [http://www.uniprot.org/uniprot/O04919 O04919]
 
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</div>
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=linoleate 13s-lipoxygenase}}
 
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{{#set: ec-number=ec-1.13.11.12}}
 
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{{#set: nb gene associated=5}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite E-PHENYLITACONYL-COA

  • common-name:
    • (e)-2-benzylidenesuccinyl-coa
  • smiles:
    • cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)c(cc(=o)[o-])=cc1(c=cc=cc=1))cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-]
  • inchi-key:
    • cizckpngzpendv-umuuvtgisa-i
  • molecular-weight:
    • 950.677

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=E-PHENYLITACONYL-COA&oldid=138709"