Difference between revisions of "E-PHENYLITACONYL-COA"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] == * direction: ** left-to...")
(Created page with "Category:metabolite == Metabolite E-PHENYLITACONYL-COA == * common-name: ** (e)-2-benzylidenesuccinyl-coa * smiles: ** cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)c(cc(=o)[o-])=cc1(c=...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] ==
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== Metabolite E-PHENYLITACONYL-COA ==
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* direction:
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* common-name:
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** left-to-right
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** (e)-2-benzylidenesuccinyl-coa
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/1.14.13.11 ec-1.14.13.11]
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** cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)c(cc(=o)[o-])=cc1(c=cc=cc=1))cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-]
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== Reaction formula ==
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* inchi-key:
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* 1 [[CPD-674]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[COUMARATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
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** cizckpngzpendv-umuuvtgisa-i
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ11355]]
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** 950.677
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** Category: [[orthology]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN-902]]
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* Gene: [[SJ11349]]
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== Reaction(s) known to produce the compound ==
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** Category: [[orthology]]
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== Reaction(s) of unknown directionality ==
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=(e)-2-benzylidenesuccinyl-coa}}
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* Gene: [[SJ11348]]
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{{#set: inchi-key=inchikey=cizckpngzpendv-umuuvtgisa-i}}
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** Category: [[orthology]]
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{{#set: molecular-weight=950.677}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ09087]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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== Pathway(s) ==
 
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* [[PWY1F-467]], phenylpropanoid biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-467 PWY1F-467]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 
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** '''9''' reactions found over '''19''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10609 10609]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R02253 R02253]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q04468 Q04468]
 
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** [http://www.uniprot.org/uniprot/P37115 P37115]
 
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** [http://www.uniprot.org/uniprot/Q9S8R8 Q9S8R8]
 
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** [http://www.uniprot.org/uniprot/P48522 P48522]
 
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** [http://www.uniprot.org/uniprot/Q42895 Q42895]
 
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** [http://www.uniprot.org/uniprot/O81928 O81928]
 
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** [http://www.uniprot.org/uniprot/O24315 O24315]
 
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** [http://www.uniprot.org/uniprot/Q43033 Q43033]
 
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{{#set: direction=left-to-right}}
 
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{{#set: ec-number=ec-1.14.13.11}}
 
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{{#set: nb gene associated=4}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=orthology}}
 
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{{#set: reconstruction tool=pantograph}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite E-PHENYLITACONYL-COA

  • common-name:
    • (e)-2-benzylidenesuccinyl-coa
  • smiles:
    • cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)c(cc(=o)[o-])=cc1(c=cc=cc=1))cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-]
  • inchi-key:
    • cizckpngzpendv-umuuvtgisa-i
  • molecular-weight:
    • 950.677

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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