Difference between revisions of "E-PHENYLITACONYL-COA"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LIPOXYGENASE-RXN LIPOXYGENASE-RXN] == * direction: ** left-to-right * common-name: ** linoleate 13s...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] == * direction: ** left-to...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LIPOXYGENASE-RXN LIPOXYGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** linoleate 13s-lipoxygenase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.13.11.12 ec-1.13.11.12]
+
** [http://enzyme.expasy.org/EC/1.14.13.11 ec-1.14.13.11]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[LINOLEIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[13-HYDROPEROXYOCTADECA-911-DIENOATE]][c]
+
* 1 [[CPD-674]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[COUMARATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16632]]
+
* Gene: [[SJ11355]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ03316]]
+
* Gene: [[SJ11349]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ08291]]
+
* Gene: [[SJ11348]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ16633]]
+
* Gene: [[SJ09087]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ12567]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5410]], traumatin and (Z)-3-hexen-1-yl acetate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410]
+
* [[PWY1F-467]], phenylpropanoid biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-467 PWY1F-467]
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5409]], divinyl ether biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5409 PWY-5409]
 
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 +
** '''9''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22781 22781]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10609 10609]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03626 R03626]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02253 R02253]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P09439 P09439]
+
** [http://www.uniprot.org/uniprot/Q04468 Q04468]
−
** [http://www.uniprot.org/uniprot/P08170 P08170]
+
** [http://www.uniprot.org/uniprot/P37115 P37115]
−
** [http://www.uniprot.org/uniprot/Q06327 Q06327]
+
** [http://www.uniprot.org/uniprot/Q9S8R8 Q9S8R8]
−
** [http://www.uniprot.org/uniprot/P38418 P38418]
+
** [http://www.uniprot.org/uniprot/P48522 P48522]
−
** [http://www.uniprot.org/uniprot/Q9S8X5 Q9S8X5]
+
** [http://www.uniprot.org/uniprot/Q42895 Q42895]
−
** [http://www.uniprot.org/uniprot/P09918 P09918]
+
** [http://www.uniprot.org/uniprot/O81928 O81928]
−
** [http://www.uniprot.org/uniprot/P14856 P14856]
+
** [http://www.uniprot.org/uniprot/O24315 O24315]
−
** [http://www.uniprot.org/uniprot/P24095 P24095]
+
** [http://www.uniprot.org/uniprot/Q43033 Q43033]
−
** [http://www.uniprot.org/uniprot/Q41244 Q41244]
 
−
** [http://www.uniprot.org/uniprot/Q41245 Q41245]
 
−
** [http://www.uniprot.org/uniprot/Q9S9D8 Q9S9D8]
 
−
** [http://www.uniprot.org/uniprot/P27481 P27481]
 
−
** [http://www.uniprot.org/uniprot/P27480 P27480]
 
−
** [http://www.uniprot.org/uniprot/P29250 P29250]
 
−
** [http://www.uniprot.org/uniprot/P37831 P37831]
 
−
** [http://www.uniprot.org/uniprot/Q43817 Q43817]
 
−
** [http://www.uniprot.org/uniprot/Q43800 Q43800]
 
−
** [http://www.uniprot.org/uniprot/Q42710 Q42710]
 
−
** [http://www.uniprot.org/uniprot/P29114 P29114]
 
−
** [http://www.uniprot.org/uniprot/Q42846 Q42846]
 
−
** [http://www.uniprot.org/uniprot/Q42847 Q42847]
 
−
** [http://www.uniprot.org/uniprot/P93184 P93184]
 
−
** [http://www.uniprot.org/uniprot/P93190 P93190]
 
−
** [http://www.uniprot.org/uniprot/Q41520 Q41520]
 
−
** [http://www.uniprot.org/uniprot/P38416 P38416]
 
−
** [http://www.uniprot.org/uniprot/Q42873 Q42873]
 
−
** [http://www.uniprot.org/uniprot/Q43438 Q43438]
 
−
** [http://www.uniprot.org/uniprot/Q43440 Q43440]
 
−
** [http://www.uniprot.org/uniprot/O24295 O24295]
 
−
** [http://www.uniprot.org/uniprot/Q42780 Q42780]
 
−
** [http://www.uniprot.org/uniprot/O24470 O24470]
 
−
** [http://www.uniprot.org/uniprot/Q43501 Q43501]
 
−
** [http://www.uniprot.org/uniprot/Q43446 Q43446]
 
−
** [http://www.uniprot.org/uniprot/O49878 O49878]
 
−
** [http://www.uniprot.org/uniprot/O49880 O49880]
 
−
** [http://www.uniprot.org/uniprot/O24370 O24370]
 
−
** [http://www.uniprot.org/uniprot/O24371 O24371]
 
−
** [http://www.uniprot.org/uniprot/Q41430 Q41430]
 
−
** [http://www.uniprot.org/uniprot/Q96573 Q96573]
 
−
** [http://www.uniprot.org/uniprot/Q96574 Q96574]
 
−
** [http://www.uniprot.org/uniprot/P38417 P38417]
 
−
** [http://www.uniprot.org/uniprot/Q39874 Q39874]
 
−
** [http://www.uniprot.org/uniprot/Q39875 Q39875]
 
−
** [http://www.uniprot.org/uniprot/Q43191 Q43191]
 
−
** [http://www.uniprot.org/uniprot/Q39611 Q39611]
 
−
** [http://www.uniprot.org/uniprot/Q42705 Q42705]
 
−
** [http://www.uniprot.org/uniprot/P93698 P93698]
 
−
** [http://www.uniprot.org/uniprot/O24320 O24320]
 
−
** [http://www.uniprot.org/uniprot/O04919 O04919]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=linoleate 13s-lipoxygenase}}
+
{{#set: ec-number=ec-1.14.13.11}}
−
{{#set: ec-number=ec-1.13.11.12}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb gene associated=5}}
 
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana}}

Revision as of 09:29, 27 August 2019

Reaction TRANS-CINNAMATE-4-MONOOXYGENASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY1F-467, phenylpropanoid biosynthesis, initial reactions: PWY1F-467
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 9 reactions found over 19 reactions in the full pathway

Reconstruction information

External links





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