Difference between revisions of "ECOAH6h"

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(Created page with "Category:reaction == Reaction RIBOFLAVINKIN-RXN == * direction: ** left-to-right * common-name: ** riboflavin kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.26...")
(Created page with "Category:reaction == Reaction CSm == * direction: ** left-to-right * common-name: ** citrate synthase, mitochondrial == Reaction formula == * 1.0 ACETYL-COA[m] '''+'''...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RIBOFLAVINKIN-RXN ==
+
== Reaction CSm ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** riboflavin kinase
+
** citrate synthase, mitochondrial
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.7.1.26 ec-2.7.1.26]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[RIBOFLAVIN]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[FMN]][c] '''+''' 1 [[PROTON]][c]
+
* 1.0 [[ACETYL-COA]][m] '''+''' 1.0 [[OXALACETIC_ACID]][m] '''+''' 1.0 [[WATER]][m] '''=>''' 1.0 [[CIT]][m] '''+''' 1.0 [[CO-A]][m] '''+''' 1.0 [[PROTON]][m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19426]]
+
* Gene: [[SJ02212]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07922]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01760]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants):
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY66-366]], flavin biosynthesis IV (mammalian):
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7863]], roseoflavin biosynthesis:
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5523]], 5,6-dimethylbenzimidazole biosynthesis I (aerobic):
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6168]], flavin biosynthesis III (fungi):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14358 14358]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00549 R00549]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
 
−
** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
 
−
** [http://www.uniprot.org/uniprot/Q59263 Q59263]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=riboflavin kinase}}
+
{{#set: common-name=citrate synthase, mitochondrial}}
−
{{#set: ec-number=ec-2.7.1.26}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=5}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 11:26, 15 January 2021

Reaction CSm

  • direction:
    • left-to-right
  • common-name:
    • citrate synthase, mitochondrial

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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