Difference between revisions of "ENOYL-ACP-REDUCT-NADPH-RXN"

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(Created page with "Category:reaction == Reaction RXN-11356 == * direction: ** left-to-right * common-name: ** 9,9'-di-cis-ζ-carotene desaturase * synonymous: ** ζ-carotene desatura...")
(Created page with "Category:reaction == Reaction ENOYL-COA-DELTA-ISOM-RXN == * direction: ** reversible * common-name: ** δ3-cis-δ2-trans-enoyl-coa isomerase * ec-number: ** [htt...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11356 ==
+
== Reaction ENOYL-COA-DELTA-ISOM-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 9,9'-di-cis-ζ-carotene desaturase
+
** δ3-cis-δ2-trans-enoyl-coa isomerase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/5.3.3.8 ec-5.3.3.8]
 
* synonymous:
 
* synonymous:
−
** ζ-carotene desaturase
+
** probable enoyl coa-hydratase/isomerase
−
** zds
+
** probable enoyl-coa hydratase/isomerase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-7526]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[CPD-7524]][c] '''+''' 1 [[ETR-Quinols]][c]
+
* 1 [[CIS-DELTA3-ENOYL-COA]][c] '''<=>''' 1 [[TRANS-D2-ENOYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05680]]
+
* Gene: [[SJ22166]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07211]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ11169]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ05681]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
+
* [[PWY-5137]], fatty acid &beta;-oxidation III (unsaturated, odd number):
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[FAO-PWY]], fatty acid &beta;-oxidation I (generic):
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30960 30960]
+
** [http://www.uniprot.org/uniprot/P21177 P21177]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P42126 P42126]
−
{{#set: common-name=9,9'-di-cis-&zeta;-carotene desaturase}}
+
** [http://www.uniprot.org/uniprot/P07896 P07896]
−
{{#set: synonymous=zds|&zeta;-carotene desaturase}}
+
** [http://www.uniprot.org/uniprot/P23965 P23965]
−
{{#set: nb gene associated=2}}
+
** [http://www.uniprot.org/uniprot/Q64592 Q64592]
−
{{#set: nb pathway associated=1}}
+
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
 +
** [http://www.uniprot.org/uniprot/P42125 P42125]
 +
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=&delta;3-cis-&delta;2-trans-enoyl-coa isomerase}}
 +
{{#set: ec-number=ec-5.3.3.8}}
 +
{{#set: synonymous=probable enoyl-coa hydratase/isomerase|probable enoyl coa-hydratase/isomerase}}
 +
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:34, 5 January 2021

Reaction ENOYL-COA-DELTA-ISOM-RXN

  • direction:
    • reversible
  • common-name:
    • δ3-cis-δ2-trans-enoyl-coa isomerase
  • ec-number:
  • synonymous:
    • probable enoyl coa-hydratase/isomerase
    • probable enoyl-coa hydratase/isomerase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5137, fatty acid β-oxidation III (unsaturated, odd number):
    • 1 reactions found over 1 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I (generic):
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






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