Difference between revisions of "ENOYL-COA-DELTA-ISOM-RXN"

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(Created page with "Category:reaction == Reaction RXN-9384 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48] == Reaction formula == * 1 HS[c...")
(Created page with "Category:reaction == Reaction ENOYL-COA-DELTA-ISOM-RXN == * direction: ** reversible * common-name: ** δ3-cis-δ2-trans-enoyl-coa isomerase * ec-number: ** [htt...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-9384 ==
+
== Reaction ENOYL-COA-DELTA-ISOM-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 +
* common-name:
 +
** δ3-cis-δ2-trans-enoyl-coa isomerase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48]
+
** [http://enzyme.expasy.org/EC/5.3.3.8 ec-5.3.3.8]
 +
* synonymous:
 +
** probable enoyl-coa hydratase/isomerase
 +
** probable enoyl coa-hydratase/isomerase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[HS]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''<=>''' 1 [[HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[CIS-DELTA3-ENOYL-COA]][c] '''<=>''' 1 [[TRANS-D2-ENOYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ22166]]
−
* Gene: [[SJ20026]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10781]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19255]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10418]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04442]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03479]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
</div>
+
* Gene: [[SJ07211]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11169]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5137]], fatty acid &beta;-oxidation III (unsaturated, odd number):
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[FAO-PWY]], fatty acid &beta;-oxidation I (generic):
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR115860
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27829 27829]
+
* UNIPROT:
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/P21177 P21177]
−
** [http://www.genome.jp/dbget-bin/www_bget?R01288 R01288]
+
** [http://www.uniprot.org/uniprot/P42126 P42126]
 +
** [http://www.uniprot.org/uniprot/P07896 P07896]
 +
** [http://www.uniprot.org/uniprot/P23965 P23965]
 +
** [http://www.uniprot.org/uniprot/Q64592 Q64592]
 +
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
 +
** [http://www.uniprot.org/uniprot/P42125 P42125]
 +
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: ec-number=ec-2.5.1.48}}
+
{{#set: common-name=&delta;3-cis-&delta;2-trans-enoyl-coa isomerase}}
−
{{#set: nb gene associated=6}}
+
{{#set: ec-number=ec-5.3.3.8}}
−
{{#set: nb pathway associated=0}}
+
{{#set: synonymous=probable enoyl-coa hydratase/isomerase|probable enoyl coa-hydratase/isomerase}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb gene associated=3}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction ENOYL-COA-DELTA-ISOM-RXN

  • direction:
    • reversible
  • common-name:
    • δ3-cis-δ2-trans-enoyl-coa isomerase
  • ec-number:
  • synonymous:
    • probable enoyl-coa hydratase/isomerase
    • probable enoyl coa-hydratase/isomerase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5137, fatty acid β-oxidation III (unsaturated, odd number):
    • 1 reactions found over 1 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I (generic):
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






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