Difference between revisions of "ENOYL-COA-HYDRAT-RXN"
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(Created page with "Category:reaction == Reaction RXN-12777 == * direction: ** left-to-right * common-name: ** 3-oxo-dihomo γ linolenoyl-[acp] synthase * ec-number: ** [http://enzyme.ex...") |
(Created page with "Category:reaction == Reaction ENOYL-COA-HYDRAT-RXN == * direction: ** left-to-right * common-name: ** enoyl-coa hydratase * ec-number: ** [http://enzyme.expasy.org/EC/4.2....") |
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(2 intermediate revisions by 2 users not shown) | |||
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction ENOYL-COA-HYDRAT-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** enoyl-coa hydratase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[TRANS-D2-ENOYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-3-HYDROXYACYL-COA]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * Gene: [[SJ10275]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ03584]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ21390]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ03913]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ07211]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ14591]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-5138]], fatty acid β-oxidation IV (unsaturated, even number): |
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-5136]], fatty acid β-oxidation II (plant peroxisome): | ||
** '''5''' reactions found over '''5''' reactions in the full pathway | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
− | * [[PWY | + | * [[PWY66-391]], fatty acid β-oxidation VI (mammalian peroxisome): |
− | ** ''' | + | ** '''6''' reactions found over '''7''' reactions in the full pathway |
+ | * [[FAO-PWY]], fatty acid β-oxidation I (generic): | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7007]], methyl ketone biosynthesis (engineered): | ||
+ | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR107667 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16107 16107] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R02685 R02685] | ||
+ | * PIR: | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T17476 T17476] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T10464 T10464] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72706 S72706] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57651 S57651] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S54786 S54786] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41006 S41006] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36678 S36678] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S32607 S32607] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S06477 S06477] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0199 JX0199] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I40678 I40678] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I37195 I37195] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G69985 G69985] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E70893 E70893] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DWRTEP DWRTEP] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D70893 D70893] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D64890 D64890] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C71435 C71435] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C69893 C69893] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C69370 C69370] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C69304 C69304] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A49613 A49613] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A39592 A39592] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P21177 P21177] | ||
+ | ** [http://www.uniprot.org/uniprot/Q08426 Q08426] | ||
+ | ** [http://www.uniprot.org/uniprot/O29814 O29814] | ||
+ | ** [http://www.uniprot.org/uniprot/O29299 O29299] | ||
+ | ** [http://www.uniprot.org/uniprot/O34893 O34893] | ||
+ | ** [http://www.uniprot.org/uniprot/O23520 O23520] | ||
+ | ** [http://www.uniprot.org/uniprot/P76082 P76082] | ||
+ | ** [http://www.uniprot.org/uniprot/P64016 P64016] | ||
+ | ** [http://www.uniprot.org/uniprot/P07896 P07896] | ||
+ | ** [http://www.uniprot.org/uniprot/O53419 O53419] | ||
+ | ** [http://www.uniprot.org/uniprot/P94549 P94549] | ||
+ | ** [http://www.uniprot.org/uniprot/Q13825 Q13825] | ||
+ | ** [http://www.uniprot.org/uniprot/P45361 P45361] | ||
+ | ** [http://www.uniprot.org/uniprot/P28793 P28793] | ||
+ | ** [http://www.uniprot.org/uniprot/P14604 P14604] | ||
+ | ** [http://www.uniprot.org/uniprot/P22414 P22414] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0] | ||
+ | ** [http://www.uniprot.org/uniprot/P34559 P34559] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01373 Q01373] | ||
+ | ** [http://www.uniprot.org/uniprot/P55100 P55100] | ||
+ | ** [http://www.uniprot.org/uniprot/P53526 P53526] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39659 Q39659] | ||
+ | ** [http://www.uniprot.org/uniprot/O52797 O52797] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=enoyl-coa hydratase}} |
− | {{#set: ec-number=ec-2. | + | {{#set: ec-number=ec-4.2.1.17}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=6}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
− | {{#set: reconstruction category= | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
− | {{#set: reconstruction comment= | + | {{#set: reconstruction comment=n.a}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:20, 18 March 2021
Contents
Reaction ENOYL-COA-HYDRAT-RXN
- direction:
- left-to-right
- common-name:
- enoyl-coa hydratase
- ec-number:
Reaction formula
- 1 TRANS-D2-ENOYL-COA[c] + 1 WATER[c] => 1 L-3-HYDROXYACYL-COA[c]
Gene(s) associated with this reaction
- Gene: SJ10275
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ03584
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ21390
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ03913
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ07211
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ14591
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5138, fatty acid β-oxidation IV (unsaturated, even number):
- 4 reactions found over 5 reactions in the full pathway
- PWY-5136, fatty acid β-oxidation II (plant peroxisome):
- 5 reactions found over 5 reactions in the full pathway
- PWY66-391, fatty acid β-oxidation VI (mammalian peroxisome):
- 6 reactions found over 7 reactions in the full pathway
- FAO-PWY, fatty acid β-oxidation I (generic):
- 6 reactions found over 7 reactions in the full pathway
- PWY-7007, methyl ketone biosynthesis (engineered):
- 4 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR107667
- RHEA:
- LIGAND-RXN:
- PIR:
- UNIPROT: