Difference between revisions of "ENT-KAUR-16-EN-19-AL"
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(Created page with "Category:gene == Gene SJ19489 == * transcription-direction: ** negative * right-end-position: ** 174882 * left-end-position: ** 152107 * centisome-position: ** 67.33914...") |
(Created page with "Category:gene == Gene SJ19511 == * transcription-direction: ** positive * right-end-position: ** 197811 * left-end-position: ** 191714 * centisome-position: ** 84.94873...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ19511 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 197811 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 191714 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 84.94873 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[3.1. | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[3.1.1.64-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[CARBOXYLESTERASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | {{#set: transcription-direction= | + | * [[GLUCONOLACT-RXN]] |
− | {{#set: right-end-position= | + | ** Category: [[annotation]] |
− | {{#set: left-end-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | {{#set: centisome-position= | + | * [[RETINYL-PALMITATE-ESTERASE-RXN]] |
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-10711]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-10767]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12252]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12575]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-8783]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXNQT-4366]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
+ | == Pathway(s) associated == | ||
+ | * [[GLUCOSE1PMETAB-PWY]] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[DHGLUCONATE-PYR-CAT-PWY]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-2221]] | ||
+ | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[NPGLUCAT-PWY]] | ||
+ | ** '''4''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-5530]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7165]] | ||
+ | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6303]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6857]] | ||
+ | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY3DJ-35471]] | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: right-end-position=197811}} | ||
+ | {{#set: left-end-position=191714}} | ||
+ | {{#set: centisome-position=84.94873 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=10}} |
+ | {{#set: nb pathway associated=9}} |
Revision as of 09:27, 27 August 2019
Contents
Gene SJ19511
- transcription-direction:
- positive
- right-end-position:
- 197811
- left-end-position:
- 191714
- centisome-position:
- 84.94873
Organism(s) associated with this gene
Reaction(s) associated
- 3.1.1.64-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- CARBOXYLESTERASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GLUCONOLACT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RETINYL-PALMITATE-ESTERASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10711
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-10767
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12252
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12575
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-8783
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXNQT-4366
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- GLUCOSE1PMETAB-PWY
- 3 reactions found over 5 reactions in the full pathway
- DHGLUCONATE-PYR-CAT-PWY
- 1 reactions found over 5 reactions in the full pathway
- PWY-2221
- 6 reactions found over 9 reactions in the full pathway
- NPGLUCAT-PWY
- 4 reactions found over 9 reactions in the full pathway
- PWY-5530
- 2 reactions found over 3 reactions in the full pathway
- PWY-7165
- 1 reactions found over 7 reactions in the full pathway
- PWY-6303
- 1 reactions found over 2 reactions in the full pathway
- PWY-6857
- 3 reactions found over 7 reactions in the full pathway
- PWY3DJ-35471
- 3 reactions found over 6 reactions in the full pathway