Difference between revisions of "ENTDB-RXN"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12547 RXN-12547] == * direction: ** left-to-right * common-name: ** retinol o-fatty-acyltransfe...") |
(Created page with "Category:reaction == Reaction RXN-13698 == * direction: ** reversible * common-name: ** alanine transaminase * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.2 ec-2.6.1....") |
||
| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-13698 == |
* direction: | * direction: | ||
| − | ** | + | ** reversible |
* common-name: | * common-name: | ||
| − | ** | + | ** alanine transaminase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.6.1.2 ec-2.6.1.2] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[PYRUVATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ19809]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * Gene: [[ | + | ** Category: [[orthology]] |
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ06815]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | |||
| − | |||
| − | |||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: | ||
| + | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
| + | * [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: | ||
| + | ** '''10''' reactions found over '''12''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | + | {{#set: direction=reversible}} | |
| − | + | {{#set: common-name=alanine transaminase}} | |
| − | {{#set: direction= | + | {{#set: ec-number=ec-2.6.1.2}} |
| − | {{#set: common-name= | + | {{#set: nb gene associated=2}} |
| − | {{#set: ec-number=ec-2. | + | {{#set: nb pathway associated=2}} |
| − | {{#set: nb gene associated= | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: nb pathway associated= | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
| − | {{#set: reconstruction category=annotation}} | ||
| − | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 20:43, 18 December 2020
Contents
Reaction RXN-13698
- direction:
- reversible
- common-name:
- alanine transaminase
- ec-number:
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 L-ALPHA-ALANINE[c] <=> 1 GLT[c] + 1 PYRUVATE[c]
Gene(s) associated with this reaction
- Gene: SJ19809
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ06815
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type:
- 9 reactions found over 10 reactions in the full pathway
- PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type:
- 10 reactions found over 12 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
