Difference between revisions of "EXOPOLYPHOSPHATASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-7796 == * direction: ** left-to-right * common-name: ** sphingolipid very long chain fatty acid α-hydroxylase * ec-number: ** [http...")
(Created page with "Category:reaction == Reaction S-2-HYDROXY-ACID-OXIDASE-RXN == * direction: ** left-to-right * common-name: ** (s)-2-hydroxy-acid oxidase * ec-number: ** [http://enzyme.exp...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7796 ==
+
== Reaction S-2-HYDROXY-ACID-OXIDASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** sphingolipid very long chain fatty acid α-hydroxylase
+
** (s)-2-hydroxy-acid oxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.18.7 ec-1.14.18.7]
+
** [http://enzyme.expasy.org/EC/1.1.3.15 ec-1.1.3.15]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD3DJ-82]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[Alpha-hydroxydihydroceramides]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[S-2-Hydroxyacids1]][c] '''=>''' 1 [[2-Oxo-carboxylates]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22188]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ22039]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ20716]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ17283]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06498]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21294]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5129]], sphingolipid biosynthesis (plants):
 
−
** '''4''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=46513 46513]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16789 16789]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01341 R01341]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P05414 P05414]
 +
** [http://www.uniprot.org/uniprot/Q07523 Q07523]
 +
** [http://www.uniprot.org/uniprot/P72842 P72842]
 +
** [http://www.uniprot.org/uniprot/P73119 P73119]
 +
** [http://www.uniprot.org/uniprot/O22544 O22544]
 +
** [http://www.uniprot.org/uniprot/O82077 O82077]
 +
** [http://www.uniprot.org/uniprot/O49506 O49506]
 +
** [http://www.uniprot.org/uniprot/Q43775 Q43775]
 +
** [http://www.uniprot.org/uniprot/O81692 O81692]
 +
** [http://www.uniprot.org/uniprot/O52792 O52792]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=sphingolipid very long chain fatty acid &alpha;-hydroxylase}}
+
{{#set: common-name=(s)-2-hydroxy-acid oxidase}}
−
{{#set: ec-number=ec-1.14.18.7}}
+
{{#set: ec-number=ec-1.1.3.15}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:06, 5 January 2021

Reaction S-2-HYDROXY-ACID-OXIDASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • (s)-2-hydroxy-acid oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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