Difference between revisions of "ExchangeSeed-ADENOSYLCOBALAMIN"

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(Created page with "Category:reaction == Reaction AMPSYN-RXN == * direction: ** reversible * common-name: ** adenylosuccinate lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.2.2 ec-4.3...")
(Created page with "Category:reaction == Reaction ExchangeSeed-ADENOSYLCOBALAMIN == * direction: ** reversible == Reaction formula == * 1.0 ADENOSYLCOBALAMIN[C-BOUNDARY] '''<=>''' 1.0 A...")
 
(5 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction AMPSYN-RXN ==
+
== Reaction ExchangeSeed-ADENOSYLCOBALAMIN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
−
* common-name:
 
−
** adenylosuccinate lyase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/4.3.2.2 ec-4.3.2.2]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADENYLOSUCC]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[FUM]][c]
+
* 1.0 [[ADENOSYLCOBALAMIN]][C-BOUNDARY] '''<=>''' 1.0 [[ADENOSYLCOBALAMIN]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06544]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis:
 
−
** '''4''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16856 16856]
 
−
* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01083 R01083]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P21265 P21265]
 
−
** [http://www.uniprot.org/uniprot/Q58339 Q58339]
 
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** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40]
 
−
** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88]
 
−
** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3]
 
−
** [http://www.uniprot.org/uniprot/P0AB89 P0AB89]
 
−
** [http://www.uniprot.org/uniprot/O65180 O65180]
 
−
** [http://www.uniprot.org/uniprot/P12047 P12047]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=adenylosuccinate lyase}}
+
{{#set: nb gene associated=0}}
−
{{#set: ec-number=ec-4.3.2.2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=1}}
+
{{#set: reconstruction category=manual}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction source=import_from_medium}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:23, 18 March 2021

Reaction ExchangeSeed-ADENOSYLCOBALAMIN

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ExchangeSeed-ADENOSYLCOBALAMIN&oldid=142074"