Difference between revisions of "ExchangeSeed-CA+2"

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(Created page with "Category:reaction == Reaction DIHYDROFOLATESYNTH-RXN == * direction: ** left-to-right * common-name: ** dihydrofolate synthetase * ec-number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:reaction == Reaction ExchangeSeed-CA+2 == * direction: ** reversible == Reaction formula == * 1.0 CA+2[C-BOUNDARY] '''<=>''' 1.0 CA+2[e] == Gene(s) associ...")
 
(4 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction DIHYDROFOLATESYNTH-RXN ==
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== Reaction ExchangeSeed-CA+2 ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
−
* common-name:
 
−
** dihydrofolate synthetase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/6.3.2.12 ec-6.3.2.12]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[7-8-DIHYDROPTEROATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DIHYDROFOLATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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* 1.0 [[CA+2]][C-BOUNDARY] '''<=>''' 1.0 [[CA+2]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ17018]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6614]], tetrahydrofolate biosynthesis:
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23585 23585]
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{{#set: nb gene associated=0}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02237 R02237]
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{{#set: reconstruction category=manual}}
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* UNIPROT:
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{{#set: reconstruction tool=curation}}
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** [http://www.uniprot.org/uniprot/Q9JVC6 Q9JVC6]
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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** [http://www.uniprot.org/uniprot/P43775 P43775]
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{{#set: reconstruction source=import_from_medium}}
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** [http://www.uniprot.org/uniprot/Q9PNK6 Q9PNK6]
 
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** [http://www.uniprot.org/uniprot/Q50990 Q50990]
 
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** [http://www.uniprot.org/uniprot/P08192 P08192]
 
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{{#set: direction=left-to-right}}
 
−
{{#set: common-name=dihydrofolate synthetase}}
 
−
{{#set: ec-number=ec-6.3.2.12}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:21, 18 March 2021

Reaction ExchangeSeed-CA+2

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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