Difference between revisions of "ExchangeSeed-CL-"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-115 RXN-115] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14...")
 
(Created page with "Category:reaction == Reaction ExchangeSeed-CL- == * direction: ** reversible == Reaction formula == * 1.0 CL-[C-BOUNDARY] '''<=>''' 1.0 CL-[e] == Gene(s) associate...")
 
(9 intermediate revisions by 5 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-115 RXN-115] ==
+
== Reaction ExchangeSeed-CL- ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.14.11.13 ec-1.14.11.13]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD1F-139]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-204]][c] '''+''' 1 [[SUC]][c]
+
* 1.0 [[CL-]][C-BOUNDARY] '''<=>''' 1.0 [[CL-]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ08018]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ14675]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ14670]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ14672]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ07557]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-102]], gibberellin inactivation I (2&beta;-hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-102 PWY-102]
 
** '''4''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15006 15006]
+
{{#set: nb gene associated=0}}
* LIGAND-RXN:
+
{{#set: nb pathway associated=0}}
** [http://www.genome.jp/dbget-bin/www_bget?R03008 R03008]
+
{{#set: reconstruction category=manual}}
{{#set: direction=left-to-right}}
+
{{#set: reconstruction tool=curation}}
{{#set: ec-number=ec-1.14.11.13}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: nb gene associated=5}}
+
{{#set: reconstruction source=import_from_medium}}
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:19, 18 March 2021

Reaction ExchangeSeed-CL-

  • direction:
    • reversible

Reaction formula

  • 1.0 CL-[C-BOUNDARY] <=> 1.0 CL-[e]

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links