Difference between revisions of "ExchangeSeed-CL-"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN 2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN] == * direction: ** left-...")
(Created page with "Category:reaction == Reaction ExchangeSeed-CL- == * direction: ** reversible == Reaction formula == * 1.0 CL-[C-BOUNDARY] '''<=>''' 1.0 CL-[e] == Gene(s) associate...")
 
(8 intermediate revisions by 4 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN 2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN] ==
+
== Reaction ExchangeSeed-CL- ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.1.1.201 ec-2.1.1.201]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OCTAPRENYL-METHOXY-BENZOQUINONE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[OCTAPRENYL-METHYL-METHOXY-BENZQ]][c] '''+''' 1 [[PROTON]][c]
+
* 1.0 [[CL-]][C-BOUNDARY] '''<=>''' 1.0 [[CL-]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* Gene: [[SJ11297]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02842]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ02693]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ07072]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ20751]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ11757]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ00609]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6708 PWY-6708]
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5870 PWY-5870]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27775 27775]
+
{{#set: nb gene associated=0}}
−
{{#set: direction=left-to-right}}
+
{{#set: nb pathway associated=0}}
−
{{#set: common-name=2-octaprenyl-6-methoxy-1,4-benzoquinone methylase}}
+
{{#set: reconstruction category=manual}}
−
{{#set: ec-number=ec-2.1.1.201}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: nb gene associated=7}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction source=import_from_medium}}
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:19, 18 March 2021

Reaction ExchangeSeed-CL-

  • direction:
    • reversible

Reaction formula

  • 1.0 CL-[C-BOUNDARY] <=> 1.0 CL-[e]

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ExchangeSeed-CL-&oldid=140624"