Difference between revisions of "ExchangeSeed-CL-"

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(Created page with "Category:reaction == Reaction 5.3.1.23-RXN == * direction: ** left-to-right * common-name: ** 5-methylthioribose-1-phosphate isomerase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction ExchangeSeed-CL- == * direction: ** reversible == Reaction formula == * 1.0 CL-[C-BOUNDARY] '''<=>''' 1.0 CL-[e] == Gene(s) associate...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 5.3.1.23-RXN ==
+
== Reaction ExchangeSeed-CL- ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** 5-methylthioribose-1-phosphate isomerase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/5.3.1.23 ec-5.3.1.23]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-444]][c] '''=>''' 1 [[CPD-1063]][c]
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* 1.0 [[CL-]][C-BOUNDARY] '''<=>''' 1.0 [[CL-]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ01231]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7174]], S-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II:
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-4361]], S-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation I:
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19990 19990]
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{{#set: nb gene associated=0}}
* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
** [http://www.genome.jp/dbget-bin/www_bget?R04420 R04420]
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{{#set: reconstruction category=manual}}
{{#set: direction=left-to-right}}
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{{#set: reconstruction tool=curation}}
{{#set: common-name=5-methylthioribose-1-phosphate isomerase}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: ec-number=ec-5.3.1.23}}
+
{{#set: reconstruction source=import_from_medium}}
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:19, 18 March 2021

Reaction ExchangeSeed-CL-

  • direction:
    • reversible

Reaction formula

  • 1.0 CL-[C-BOUNDARY] <=> 1.0 CL-[e]

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links